Nodularia spumigena: BMF81_02425
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Entry
BMF81_02425 CDS
T05403
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nsp
Nodularia spumigena
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsp03400
]
BMF81_02425 (sbcC)
DNA repair and recombination proteins [BR:
nsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BMF81_02425 (sbcC)
Archaeal homologous recombinant proteins
BMF81_02425 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_27
AAA_29
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AVZ30634
UniProt:
A0A2S0Q8C6
LinkDB
All DBs
Position
complement(2770345..2773371)
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACICGSNGAGKSSLLEAITWAIWGQSRAGVEDDV
IHSGAKEVRVDYVFQCNQQKYRVIRTRVRGASGVLEFQIETASGFRALTGKGVRATQDLI
LQHIKLDYDTFINSAYLRQGRADEFMIKRPSERKEILAELLKLNQYDQLEERAKETYRQF
KARAEELERSLESSQIQLQQQEATQAQKTELETELNQLQQVQAFENIQLQSLQVVQHQRQ
NWQQQLHFVKQQHQNLTQDGDRLQQEQSAVQTQLSDLEAILNQETEIQTGFTQYQTLQAQ
EEAFATKFQEYTRATALLQQKQQQLTSQIHALERELQQVEGQLVALEQQEPEIQQTLNKS
GEVEAALTQLTAARRRVTQLDELQMQVSPLLQQRQNLQSQLDRVHAGLVARLEQLQATEN
QLQRSSQRQPQLQQAARDLEIQISQMEKDKVYLQRVQEKGQERRHFMERLQAQQREYERL
LAELEQKLEMLRTPDAMCPLCERPLDEHHWNRVVDKTKDEYQDTEGQLWVFREQKAVSDR
EIQVLRQEYREILQKVSPYDTLREQRGQLAAQLQSTSDADQQLQELAAEKQHLERSLQAG
DYAPDKQAELQQLAEYLQQLNYNEQDHALARSEVERWRWAEIKQGQIKDAAKRQAQIVAR
KPELQASISQLQTRIQQDKIDSDCAKEIAQLERQISEIAYSSEEHHNLRVAVRQAQSWQL
RYQQLLSAQQQYPQLQQRWQDLEVSRSERLEERQKLLTQIESISQELVKSANPTQEITVL
EQQIQTRRRQLDDKIANLGRLEQLMLQLETLQNQYEQQQQQLQSCQQEQRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFITQKSGRSSKAKKKDAKLIDTLDI
LIADSRGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIIDEGFGTQDAEGCD
RLIASINAIACDFACILTVTHMPHLKEAFQARIEVNKTQQGSQVSLSI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtccaacttatcctcaaaaacttcctcagttaccgtgatgcaactttagat
tttcgcggtttgcatacggcttgtatttgtggttctaatggtgcgggtaaatcttctctt
ttagaagcaatcacatgggcaatttggggtcaaagccgtgccggtgttgaagatgatgtg
attcattcgggtgcaaaagaagttcgggttgattatgtgtttcaatgtaatcagcaaaaa
tatcgcgtaattcgcaccagagttcggggtgctagtggtgtcttagaatttcaaatagaa
acagcttcggggtttcgcgccttgactgggaaaggagtcagagctacacaggatttaatt
ttacaacatatcaaactggattacgacacttttattaattcggcttacttgcgtcaaggt
cgtgctgatgagttcatgatcaagcgtcccagtgaacgtaaggaaattttagcagaatta
ttaaaactgaatcaatatgatcaattggaagaacgggcaaaagagacataccgccagttt
aaggcgagagcggaagagttagagcgttctttggaatcgagccaaattcagttacaacaa
caagaagcaacacaagcccaaaaaacagagttagaaactgaactcaaccaattgcaacaa
gttcaggcttttgagaatattcaattacaaagtttgcaggttgtccagcaccagcgccaa
aattggcaacaacagctgcattttgtcaagcaacaacatcaaaatttaactcaagatggc
gatcgcttgcaacaagaacagtcagcagttcaaactcagttatcagatttagaagccatc
ttaaatcaggaaactgaaattcaaactggttttacacaatatcaaactctccaagctcaa
gaagaagcttttgcgactaaatttcaagaatatacccgtgcaacggcgttacttcaacaa
aagcaacaacaattaactagccaaatacacgcactagaaagggaactgcaacaagttgaa
ggacaattagttgcattagaacaacaagagccagaaattcagcagactctcaataaatct
ggtgaagtcgaagcagctttaacccaacttaccgcagcccgtcgccgtgtgactcaatta
gatgaactgcaaatgcaggtttctcctttattgcaacaacggcaaaatttgcaaagtcaa
ctggatagggttcatgctggtttagtagcacgcttagaacagttacaagctacagaaaac
caactacaacgatcctcacaacgtcaaccgcaattacaacaagcggcgagagacttagaa
atccagatttcgcaaatggagaaagacaaggtttatttgcaacgagttcaggaaaaaggc
caggaaagacggcattttatggaacgtctgcaagctcaacagcgagaatatgaaagatta
ttggctgaattggagcaaaaactggaaatgcttcgcacccctgatgcaatgtgtcctctg
tgtgagcgtcctttagatgaacatcattggaatcgtgtggtagacaaaaccaaagatgag
tatcaggatactgagggacaattgtgggtattccgggaacaaaaagcagtgtcagaccga
gaaattcaggtactgaggcaagaatatcgggagatattgcaaaaggtatcaccttatgat
acactcagagaacaaagaggtcaattagccgcacaactgcaatcaaccagtgatgctgac
caacaattacaagaactagctgcggaaaaacaacatttagagcgatcgctgcaagcaggt
gattacgccccagacaaacaggcggaattgcaacaattagcagaatatttacaacaactg
aattataatgaacaagaccatgctctggctagaagtgaagtagagcgttggcgatgggca
gaaattaaacaagggcaaattaaagacgcagccaagcgacaagctcaaatagtcgcccgc
aagccagagttacaagcaagcatttctcaattacagactcgaattcagcaggataaaatt
gattctgactgtgcaaaagaaattgctcaacttgagcgtcagatttcggaaattgcttac
agttcagaggaacatcataacctgcgcgtagctgtccgccaagcccaatcttggcaatta
cgttatcaacaacttttatcagcccaacagcagtatccccaactccagcaaagatggcaa
gatttagaggtttccagaagcgagagattggaagaacggcaaaaactgctgactcaaatt
gaaagtatttctcaagagttagttaaatcagctaaccccactcaggaaattactgtttta
gagcagcaaattcaaacccgtcgccggcaacttgatgataaaatagcgaatctggggcgt
ttggaacagttgatgctgcaattagaaactttgcaaaatcagtatgagcaacagcagcag
caattacaatcttgtcagcaggaacaacgagtttatcaggaattggcgcaggcgtttggt
aaaaatggcatccaagcactgatgattgaaaatgtcttaccccaattggaagctgagaca
aatcaactgttatcgcggttgagtgctaatcaattgcacgtacaatttattactcagaaa
tctgggcggagtagtaaggcgaagaagaaagatgcgaagctgattgatactttagatatt
ttaattgctgattctaggggaacgcgagcttatgaaacttactctggtggggaagctttt
agaattaattttgctatccgtttagctctggcgaaattattggctcagagggcaggggcg
gctttacaattgttaattatagatgaaggctttgggactcaggatgccgaaggatgcgat
cgcttgattgcgtccataaatgcgatcgcttgtgatttcgcctgtatcctcactgtaaca
catatgccccacctcaaagaagcctttcaagcccgcatagaggttaataaaacccagcaa
ggttcccaagtcagtttgtcaatttaa
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