Nodularia spumigena: BMF81_02490
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Entry
BMF81_02490 CDS
T05403
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nsp
Nodularia spumigena
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsp03016
]
BMF81_02490
Enzymes [BR:
nsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BMF81_02490
Transfer RNA biogenesis [BR:
nsp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BMF81_02490
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AVZ30657
UniProt:
A0A2S0Q8G5
LinkDB
All DBs
Position
complement(2843618..2845678)
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AA seq
686 aa
AA seq
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MDKGTLVEFRVQGDRRLGVVDRPDGKTRWFIVDERGQSHSLAPRQITYTVNGQTYKPSEI
ASFQGQVQPYIDPSSLEVAWELLVEDGETVTPAQMANLLFSESEAAACYAAHCLLSEDKL
YFKQKGEAYEPRTAAQVAELKHQTEVKALKAKGQEEFLARVEQALQGEAVEWQRHDRQRL
EALEKYAALLADVVRMGVNYDTLARAYPPPAPVLETMNMLGRPATPPGAFQLLIDLGWWD
AHENLFVRRSSIPVQFPSKVLEVAQQRLDFPPTDLDTNRLDLSHLKVYTIDDESTTEIDD
GLSWEILPDGRERLWVHIADPTRWLVPEDELDLEARKRGSTVYLPTGMVPMFPELLATGP
MSLVQGRISCALSFGVVLDESGGVEDYTIHPSFIKPTYRLTYEDVDEMLELGVEAEPEIE
AIANWAKRRKSWRYNQGAISINMPEATIKVKNDQIDIDILDDSSSRQLVAEMMIMAGEVA
ARYGQAHNIPLPFRGQPQPELPPDEELLLLPAGFVRSCAMRRCMPKSEMSITPLRHAGLG
LNTYTQATSPIRRYSDLLTHFQLKAHLRGESLPFTADQLREVMMTVTSTTQEVTMVERQT
NRYWALEYLRRHPDQVWDVTVLMWLREDSNLALILLEDLGLQLPMFFKRSVGLGEQVLVK
VSHADPQKDMIQFQEIIYQESHQATN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggataagggtacgctagttgaatttagggttcaaggcgatcgccgtctgggagtagta
gaccgcccggacggtaaaacccgttggtttatagtagacgaacgtggtcaatctcacagc
ctcgcgcctagacaaattacttatacagttaacggacaaacctataaaccctctgaaatt
gccagttttcaagggcaagttcaaccttatatagatccctccagtctggaagtagcttgg
gaattactggtggaggatggagaaacagtcacaccagcccaaatggcgaatctgctgttt
tccgaatcagaagcggctgcttgttatgctgcccattgcttgttatcagaagacaaactc
tatttcaaacaaaaaggagaagcctatgaaccacgcacggcggcgcaggtagcagaactc
aaacaccagacagaagtaaaagcactcaaagccaagggacaagaagaatttttagctcgc
gtagagcaagccctccaaggcgaagcagtggaatggcaacgccacgaccgccagcgatta
gaagccctggaaaaatacgcagcattgctggctgatgtcgtgcgaatgggagtaaattat
gatactttagctcgtgcctatccgccgccagccccagtgttagaaacaatgaatatgctg
ggtcgtccggcaactcctccaggagcctttcagttattaatagatttaggttggtgggat
gcccatgaaaacttgtttgtgcgtcgttcgtcaattccggttcagtttcctagcaaggta
ttagaagtggcgcaacagcgtttggatttcccccccactgacttagatacaaatcgccta
gatttgtctcatttaaaggtttatacaattgatgatgaaagcaccacagagatagacgat
ggtctaagttgggaaatactaccagatgggcgagaacggttgtgggtgcatattgccgat
cctacccggtggttagtcccagaagatgaattagacttagaagccagaaaacggggcagt
accgtatatttaccaacggggatggttcccatgttccccgaattattggcaactggtccc
atgagtttggtacagggaaggatttcttgcgccttaagttttggcgtggttttagatgaa
agcggtggtgtagaagattacaccattcatcctagttttatcaagccaacttatcgcctc
acctacgaagatgtggatgagatgttggagttaggtgtggaagcagaaccggaaattgag
gcgatcgctaactgggcaaagcggcgcaaatcttggcggtataatcaaggagccatcagc
atcaatatgccagaggcgacgatcaaagtcaaaaatgaccagatcgatattgatatttta
gatgattcctcatcgcggcaattagtagcagaaatgatgattatggcgggtgaagtagca
gcccgttacggtcaagctcacaatatacctttgccctttcgcggtcaaccacaaccagaa
ttacccccagacgaagaattacttttactcccagccggatttgttcgctcctgcgccatg
cgtcgttgtatgcccaagagtgaaatgagcattacgcctttacgccatgctggtttaggt
ttaaatacgtacactcaagcaacttctcccattcgccgttacagtgacttactgactcac
tttcaacttaaagcccacttacggggtgaaagtttaccctttacagccgaccaactccga
gaagtgatgatgacagtcacctctaccacccaagaagtcacaatggtagaacggcaaact
aatagatattgggctttagaatatttgcgccgtcatcccgaccaagtttgggacgtgaca
gttttaatgtggttacgagaagacagcaatttagcactaattctgttagaagatttgggc
ttacagttgccgatgttctttaaacgttctgtaggattaggagaacaggtattagtcaaa
gttagtcacgctgacccgcaaaaagatatgattcagtttcaggaaataatttatcaagaa
agccatcaagcaacgaattag
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