Nodularia spumigena: BMF81_02556
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Entry
BMF81_02556 CDS
T05403
Symbol
phrB_2
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nsp
Nodularia spumigena
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsp03400
]
BMF81_02556 (phrB_2)
Enzymes [BR:
nsp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BMF81_02556 (phrB_2)
DNA repair and recombination proteins [BR:
nsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BMF81_02556 (phrB_2)
Prokaryotic type
BMF81_02556 (phrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AVZ30691
UniProt:
A0A2S0Q8J1
LinkDB
All DBs
Position
complement(2915517..2916965)
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AA seq
482 aa
AA seq
DB search
MSDLILFWHRRDLRISDNTGLVAARGRSAKVVGVFCLDPQILSRDDVAPARVTYMMGCLQ
ALQQRYAQVGSQLLILHGNPVEVIPALAKALNAKAVFWNWDVEPYSQTRDRTIIDILKSN
SIEFLHENWDQILHAPDEIRTGAKSPYTVYSPFWKNWSSKPKAKSVETLQNAAGLTETEQ
EIAKQAGVIPLPTARDLGFIWDGELSISPGEAAAQERLQEFTDSAITEYQEQRNLPGVDG
TSRLSAALKFGVIGIRQVWEATLEAQEFSRSEETAASIRTWQQELAWREFYQHAMYNFPE
LAEGAYRDTFKNFPWQNNDEYFQAWCEGRTGYPIVDAAMRQLNEMGWMHNRCRMIVASFL
TKDLMINPQLGEKYFMQKLIDGDLSANNGGWQWSTSSGMDPKPLRIFNPASQAQKFDGEG
EYIRQWVSELRSVDTEYLVTGKIPPLELQSIGYPAPIVDHKVQQGLFKKMYQQQKALSSS
ES
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttaattttgttttggcatcgtcgtgatttacgtatttctgataatacagga
ttagtggcggctagagggcgcagtgccaaagttgtgggcgtgttttgccttgatcctcaa
attctgtcacgggatgatgtcgccccggcgagagtcacctacatgatgggctgtttacaa
gcactacaacagcgatatgcacaagttggtagccaattgttaatcctacatggcaatcct
gtagaagttataccagctttagcaaaagcgttaaatgccaaagctgtattttggaactgg
gatgtagaaccctattctcaaacacgcgatcgcacaataattgatatcctaaaatcaaac
agcattgaatttctgcacgaaaattgggatcagattctccacgcaccagacgagattcgt
acaggtgcgaaaagtccttacactgtttacagtcctttctggaaaaactggagtagcaaa
cccaaagccaaatcagtagaaacactgcaaaatgccgcaggtttaacggagactgaacag
gaaattgctaaacaagcgggggttattccattacccacagctagagatttaggatttatc
tgggatggagaattaagtatttcccctggagaagccgcagcccaagaaagattacaggaa
tttactgacagtgcaatcactgaataccaagaacagcgtaaccttcctggtgttgatggt
acatcaagattgagtgcagctttgaaatttggtgtgattggcattcgtcaggtgtgggaa
gccactttagaggcgcaagaatttagccgcagcgaagaaacagcagctagtatacgtaca
tggcaacaggaattagcctggcgggagttttatcaacacgccatgtataattttccagaa
ttggctgagggtgcttaccgtgacacgttcaaaaactttccttggcaaaataacgatgaa
tattttcaggcttggtgcgaagggagaactggctatcccattgtagatgcggcaatgcgc
caattaaatgaaatgggttggatgcacaaccgttgtcggatgattgtggctagtttttta
actaaagatttaatgataaatccccaattgggagaaaaatactttatgcagaagttgatt
gatggtgatttatctgctaataatggcggttggcaatggagtacttctagtggtatggac
ccgaagccattaaggatttttaaccctgctagtcaagcacaaaaatttgatggggaagga
gaatatattcgccaatgggtatcagaattacggtctgtagatacagaatatttagtaact
ggtaaaattccccctttggaacttcaaagtattggctatcctgcaccaattgtagatcat
aaggtgcaacaaggtttatttaaaaagatgtatcaacagcaaaaagccctcagtagttct
gaatcttga
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