Nodularia spumigena: BMF81_02652
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Entry
BMF81_02652 CDS
T05403
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nsp
Nodularia spumigena
Pathway
nsp03030
DNA replication
nsp03430
Mismatch repair
nsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMF81_02652 (holA)
03430 Mismatch repair
BMF81_02652 (holA)
03440 Homologous recombination
BMF81_02652 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsp03032
]
BMF81_02652 (holA)
03400 DNA repair and recombination proteins [BR:
nsp03400
]
BMF81_02652 (holA)
Enzymes [BR:
nsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMF81_02652 (holA)
DNA replication proteins [BR:
nsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMF81_02652 (holA)
DNA repair and recombination proteins [BR:
nsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMF81_02652 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
RNase_3_N
AAA_assoc_2
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
AVZ30732
UniProt:
A0A2S0Q8Q3
LinkDB
All DBs
Position
complement(3017745..3018740)
Genome browser
AA seq
331 aa
AA seq
DB search
MPIYVYWGEDDFAIEKAVTILRDRILDPLWTSFNYTSLSPDQPDAAIAGLNEVMTPPFGA
GGRLVWLINTTLCQHCPENILAELTRTLSVIPENSWLLLTTRNKPDERLKSTKLLKKSAD
EFREFPLIPPWKIDLLVQSVNQVAQTVGVKLTNRTAEILAEAVGNDTRLLYNEMEKLRLY
TSDRGKPLDVETITQLVRNTTQNSLQLAAAIRMGETAKALTILADLINAAEPGLKIVATL
IGQFRTWLLVKIAMETGERNPQAIAKLAEINNPKRIYFLQQEVKSLSVQQLISCLPLLLE
LEVSLKQGATEAQTLQTKVIELCQVCQRGGH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttatgtatactggggtgaggatgattttgctatcgaaaaagcagtgacaata
ttgcgcgatcgcattctcgatcctctctggacaagttttaactatacatctttatcccca
gaccaacccgacgcagcaattgcgggtttaaatgaagtcatgacaccaccctttggcgct
ggtggacggttggtgtggctcatcaatactaccctgtgtcagcattgcccagaaaatatt
ttagcagaactcacgcgcaccctctcagtcattcccgaaaactcctggttattactcacc
acccgcaacaaaccagatgaacgcctgaaatctaccaaattactgaaaaaatctgccgat
gaatttcgagaatttcccctcatcccaccctggaaaatagatttgctggtacagtctgtg
aatcaagttgctcaaactgtgggcgtaaaactaacgaaccggactgcggaaattttagca
gaagctgtgggcaatgacacacgactcctgtataatgaaatggaaaaactacgactttat
acatcggatagaggtaagcctttagacgtagagaccattacgcaattagttagaaatact
actcaaaatagtttacaattggcagcagcaattagaatgggagagacagctaaagcctta
actattttggctgatctcatcaatgctgccgaaccgggattaaagatagttgctactctc
ataggtcaatttcgtacctggttattggttaaaattgctatggaaactggggaacgcaat
ccccaagcgatcgctaaattagccgaaattaacaatcccaaacgtatttactttttgcag
caagaagtgaaatcactttctgtacagcaattaatctcctgcttaccactactattagag
ttagaagtaagtctcaagcaaggagccactgaagctcaaacacttcagactaaagtaata
gaactttgtcaagtatgtcaacgtggcggacattaa
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