Nodularia sphaerocarpa: BDGGKGIB_00384
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Entry
BDGGKGIB_00384 CDS
T08134
Symbol
cmpR_1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nsph
Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsph03000
]
BDGGKGIB_00384 (cmpR_1)
Transcription factors [BR:
nsph03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BDGGKGIB_00384 (cmpR_1)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HAD_2
Motif
Other DBs
NCBI-ProteinID:
ULP70765
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Position
425108..426061
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AA seq
317 aa
AA seq
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MNQATLHQLKVFEAAARHSSFTRAAEELFLTQPTVSMQIKQLTKSVGLPLFEQVGKRLFL
TEAGRELFATCRQIFETIAQFEMTVADLKGLKQGQLRLAVITTAKYFVPRLLGPFCQLYP
GIEISLQVTNHERILERMVNNMDDLYIMSQVPESLDVSYEPFLDNPLVMFAPVNHPLAKE
KNIPIGRLTNEPFIMREPGSGTRRAVQQLFDEHGVKVKVKLELGSNEAIKQAIAGGLGIS
VLSLHTLMPDSSEFSILDVEHFPIKRTWFLGYPAGKQLSIVARTYYEYLLEAAKKFVEET
GFSAYSKSEDVPTSFGD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaggcgacgctacaccagttgaaggtgttcgaggcggcagcaaggcacagtagc
tttactcgtgcggctgaggaattatttctgactcaacccaccgtgtccatgcaaattaaa
caactcacaaaatcagtagggttgccattatttgagcaggtgggaaaacgtctctttttg
acagaagccggaagagaattatttgcaacttgtcggcagatttttgaaaccatagcccag
tttgaaatgactgtggcggatttaaaaggcttaaagcaaggacaattacgcttggctgtg
attacaacggcaaagtattttgtcccccgtttattaggtccattttgtcaactttatcca
ggaattgagatttcgttacaagtaacgaaccacgaacgcatcttggaacggatggtgaat
aacatggatgacttatacattatgagtcaagtcccagaaagtctagatgtcagctatgaa
ccatttttagacaacccgttagtaatgtttgcaccggttaatcatcctttagcaaaagag
aaaaatatacctataggaagattgacaaatgaaccttttattatgcgggaaccgggttca
ggaactcgccgggctgtgcagcaactttttgatgaacatggcgtgaaggtaaaagttaaa
ctggagttggggagtaatgaagcgattaaacaagcgatcgcaggtggattaggaatttct
gttttatcgcttcataccttaatgccagattcttctgagttcagcattttggatgtagaa
cactttcccatcaagcgaacttggttcttagggtatcctgctggtaaacagttgtctatc
gtcgctcgtacttattatgagtatctgctggaagccgcgaaaaagtttgttgaggaaact
ggtttttctgcttacagtaaaagtgaggatgttcccactagctttggcgactag
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