Nodularia sphaerocarpa: BDGGKGIB_00448
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Entry
BDGGKGIB_00448 CDS
T08134
Symbol
ytrA
Name
(GenBank) HTH-type transcriptional repressor YtrA
KO
K07978
GntR family transcriptional regulator
Organism
nsph
Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsph03000
]
BDGGKGIB_00448 (ytrA)
Transcription factors [BR:
nsph03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BDGGKGIB_00448 (ytrA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
HTH_36
HTH_Crp_2
MarR
Rrf2
TrmB
HTH_IclR
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
ULP70826
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Position
500593..501579
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AA seq
328 aa
AA seq
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MIQFRIQPDSEIPASNQLFNQIRFAIASRQYPPGYKLPSTRALAMQTGLHRNTISKVYRQ
LEEDGFVESLAGSGIYVRTQGHEGGGRVQYPIVKKQAEDAYKLVQKALDEMLSQGYSLNQ
ARELFLGEIDWRLRCSAQVLVAVPSHDMGAGELMVYELEQSLNIPVQLVAMEELTAVLDK
TNSATVVTSRYFISDVEAIAAPKSVRVIPLDIYDYSKELDLLKTLPKQNCVGIVSLSSGI
ARAAEVILHGLRGDELLILTAQPKDAYKLQAIVKRAEVIISDQASFPTVHAAVQASLEDI
IRPPKLIKVENYIGANSINLLKRELGLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgattcaattccgtattcagccagacagtgaaattcctgcttccaaccagctatttaat
caaattcggtttgcgatcgcctcccggcaatatccgcctggatacaaattgcctagcaca
agggcgttagccatgcaaactgggttacaccgcaataccattagcaaagtttaccgccag
ttggaagaagacgggtttgtggaaagcctagctggttcgggaatttatgtgcgtacccaa
gggcatgaaggcggtggcagggtgcaatacccaatcgtcaaaaaacaagccgaagatgcc
tataaactggtgcaaaaagcacttgatgaaatgctttctcaaggctattcactcaatcaa
gcgcgggagctatttttaggtgaaattgactggcgcttacgttgtagcgctcaagtgctg
gttgcagttccctctcatgacatgggtgctggcgaattgatggtgtatgagttagaacag
tctctaaatatacctgtacagttggtagcgatggaagaattaacagctgtgctagataaa
actaactcagcaacggtagtcaccagtcgttattttattagcgatgtggaagcgatcgcc
gccccgaaatctgtacgtgtaattcctctagatatctacgactacagcaaagaacttgac
ctgctaaaaaccttgccaaaacaaaattgtgtaggtatagttagtctcagttcgggaatt
gctcgtgccgccgaagtaattcttcacggtttacgaggagatgaactattgatcctgact
gcacaaccaaaagatgcgtacaaacttcaagcgatcgtcaagcgggcggaagtaattatc
agcgatcaagccagttttcccactgtacacgcagcagtacaagcatccctggaagacatt
attcgtccacctaaactgattaaggtagaaaattacattggggctaattcgattaacttg
ttaaaacgcgaactgggtttgggctag
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