Nodularia sphaerocarpa: BDGGKGIB_00737
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Entry
BDGGKGIB_00737 CDS
T08134
Symbol
rapA_2
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
nsph
Nodularia sphaerocarpa
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
DEAD_2
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ULP71114
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Position
839428..842655
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AA seq
1075 aa
AA seq
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MAILHGNWLLKDNNSCLFIWGETWRSSKASLNPSASPDIPVHPLVMSPVELSEWLSSQNI
KIPSLIQQTQVAVTATGRTRKSTTPTKISLPTHSQIIDLPTHILENNQQEIEFISPLHSA
TLGSEINTPQYLQPWQVEGFCLNPTEAIKFLAAVPLNAAREEDTLFGGDLRFWSQIARWS
LDLISRCKFLPTIQRQFDSSIVARWQVLLDSAVDGTRLEKFSAKMPLACRTYQKSAELEE
KYLAVDFATEPQELLLGFLNSTIDAQVREMLASQPLLETRVMASLPSAVRQWLQGLTSAS
HTVNADAMEVERLEAALKSWTMPLQYQLLGKALFRACFQLLPPASGETDWLLAYFLQAAD
DTDFLVDAATIWHHPVEQLVYQNRTIDQPQETLLRGLGLASRLYPVIATSLETEYPQSCR
LNPLQAYEFIKSVAWRFEDSGLGVILPPSLTNREGWANRLGLKISAETQKKKQGRLGLQS
LLNFQWQLAIGGQTISKTEFNKLVALNSPLVEINGEWVELRPQDIKTAQTFFASRKDEMT
LSLEDALRLSSGDTQAIEKLPVVSFEASGTLQELIGALTNNQTIAPLPTPANFKGQLRPY
QERGAAWLAFLERWGLGACLADDMGLGKTIQLIAFLLHLKEQDALENPMLLVCPTSILGN
WEREIKKFAPTLKVLQHHGDKRLKGKAFVEAVRKHDVVITSYSLLHRDIKSLQSVDWQMI
VLDEAQNVKNPEAKQSQAVRQLKTTFRIALTGTPVENKLQELWSILDFLNPGYLGNRQFF
QRRFAMPIEKYGDTASLNQLRGLVQPFILRRLKTDRDIIQDLPEKQEMTVFCGLAAEQAA
LYQQVVEASLAEIESAEGLQRRGMILGLLVKLKQICNHPAQYLKLATLEQHNSAKLQRLD
EMLNVALESGDRALIFTQFAEWGKLLKAHLQQTLGQEILFLYGGSTKKQREEMIDRFQQD
PQGPPIMILSLKAGGVGLNLTRANHVFHFDRWWNPAVENQATDRVFRIGQTRNVQVHKFV
CTGTLEEKIHDMIESKKQLAEQVVNTGEEWLTEMDTNQLRDLLILDRSAIIEEED
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacacggtaattggttactaaaagataacaatagttgtttatttatttgg
ggtgaaacttggcgttcatcaaaagcaagtttgaatcctagtgcatcaccagatatacca
gtacatccattggtaatgtcaccagttgagttgagtgagtggttaagttctcagaatatt
aaaattcctagcttaatacagcaaacccaagttgctgtaactgctactgggcgaactcgt
aaaagtacaactcctactaaaatcagcttaccaacgcactctcaaatcattgatttacca
actcatatcttagaaaataatcaacaagaaatagaatttatttcccctttgcattctgct
actttgggttctgaaatcaacacacctcaatatctccaaccgtggcaagtcgagggtttt
tgtctcaaccccacggaagcaataaaatttctcgctgctgttcctttgaatgctgcgagg
gaagaggatactttgttcggtggagatttacgtttttggtcacaaattgcccgttggagt
ttggatttaatctctcggtgtaagtttctgccaactattcaaagacagtttgatagttct
attgtcgctaggtggcaagtacttttagatagtgctgtggatggaactcgcttagaaaag
ttttctgcaaagatgccattagcttgtcgtacttatcaaaaaagtgcggagttggaagaa
aaatatttggcagtagatttcgccactgaaccccaggaattattattgggatttctcaac
agtacgatagatgcccaagtgcgggagatgttagcttctcaacctctattagaaactaga
gtgatggcatctttaccatctgcggtgcgacagtggttgcaaggtttaacgagtgcatct
cacacagtcaatgcagatgcaatggaagtagaaagattagaagcggcgctgaaatcttgg
actatgcctttgcaatatcaactgctaggaaaagcgttgtttcgcgcctgttttcaactg
cttcctcctgcatctggtgaaacagattggctattggcatattttctccaagctgcggat
gataccgattttttagtagatgcggcaactatttggcatcacccagttgaacaattagtt
tatcaaaatcgcaccattgatcaaccccaagaaactttattgcgggggttggggttagct
tcgcgattatatccagttattgcaacgagtttagaaacagaatatccccaatcttgtcgc
ctcaacccattacaagcttatgaatttatcaagtctgtagcttggcgatttgaagatagt
ggtttgggggtaattttgcctcctagtttgacaaatcgtgaagggtgggcgaatcgtttg
gggttgaaaattagtgctgaaactcaaaagaaaaaacagggacgtttgggtttacaaagt
ttactgaattttcaatggcaattggcaattggtggacaaacaatttctaaaactgagttt
aataaacttgtggctttaaatagcccacttgtagaaattaacggcgagtgggtggaattg
cgaccccaggatattaaaacagcacagacgttttttgcttctcgtaaagatgaaatgacg
ctttctttggaagatgctttacgtttgagttcgggagatacccaggcgattgaaaagtta
cctgtggtcagttttgaagcatctgggacattacaagagttaattggggcgttaacgaat
aatcaaaccattgcacccctccccacacctgccaattttaaaggacagttacgaccttat
caagaaagaggggcggcttggctggctttcctagaacgttggggtttgggtgcttgtcta
gctgatgatatgggactggggaaaacaattcagttaattgcctttttactgcacctcaaa
gaacaagatgcactagaaaatcccatgttacttgtttgtccgacttctattttaggtaac
tgggaacgggaaattaaaaaatttgcgcctactttgaaagttttacagcaccacggcgat
aaacgtctcaaaggtaaagcatttgtagaagcagtaagaaaacacgatgtagttattacc
agttactccctcttacaccgtgatattaaatctttgcaaagtgttgattggcagatgatt
gtattagatgaagcccagaatgtgaaaaatcctgaagctaaacaatctcaggctgtgagg
caattaaaaactacatttcggatagctttaacaggaaccccagtagaaaataaactccag
gaattgtggtctattttggatttcctcaatcctgggtatttgggaaatcgtcaatttttc
cagagacgttttgctatgcctattgaaaagtatggtgatactgcttctttaaatcaattg
cggggtttagttcaaccgtttattctgcgtcgtctgaaaacagatcgtgatattattcaa
gatttgccagagaagcaagaaatgacggttttttgtggtcttgctgctgaacaagctgca
ctttatcaacaagtagttgaagcatctttggcagagattgaatctgcggaaggtttgcaa
cgtcgaggaatgattttaggtttactagttaaacttaaacaaatctgtaatcacccagcc
caatatttaaagttagccacattagaacaacataattctgcgaaattgcaacgactagat
gaaatgttaaatgtggctttggagtcaggtgatagggctttgattttcacccaatttgct
gaatggggtaagttattaaaagctcatttacagcaaacacttgggcaagaaattttgttt
ttatatggtggtagcactaaaaaacaacgagaggaaatgattgaccgtttccaacaagac
ccccaaggacctccgattatgattctttctttaaaggcgggtggtgtgggtttgaattta
actagggctaatcatgtatttcactttgatagatggtggaatcccgcagtggaaaatcaa
gccacagatagagtttttcgcattggtcaaacgcggaatgtgcaagtgcataagtttgtc
tgcactggtacgttagaagagaaaattcatgacatgattgaaagtaaaaaacaattggct
gaacaagttgttaatactggtgaggaatggttaactgaaatggatacaaatcaattgcgc
gatttactcattcttgatcgcagtgcgataattgaagaggaagattag
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