Nodularia sphaerocarpa: BDGGKGIB_00840
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Entry
BDGGKGIB_00840 CDS
T08134
Symbol
hlyB_1
Name
(GenBank) Alpha-hemolysin translocation ATP-binding protein HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph02010
ABC transporters
nsph03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BDGGKGIB_00840 (hlyB_1)
03070 Bacterial secretion system
BDGGKGIB_00840 (hlyB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsph02000
]
BDGGKGIB_00840 (hlyB_1)
02044 Secretion system [BR:
nsph02044
]
BDGGKGIB_00840 (hlyB_1)
Transporters [BR:
nsph02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BDGGKGIB_00840 (hlyB_1)
Secretion system [BR:
nsph02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BDGGKGIB_00840 (hlyB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
Peptidase_C39
SMC_N
AAA_22
RsgA_GTPase
AAA_30
ABC_ATPase
DUF87
AAA_16
MMR_HSR1
Zeta_toxin
AAA_29
DUF3987
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
ULP71217
LinkDB
All DBs
Position
complement(1009028..1011976)
Genome browser
AA seq
982 aa
AA seq
DB search
MTTFTPAISQFLETTPPFNLLSTSAIEQLTQKAQLLRYRMGHTIVVKETMPAHVAILYEG
QARLIGYTYNSPVPDTLELLQPGAILGWVSLLRGVACETAIASIESVCLTIPSVDFRTLL
EKEPAFKEALTKRCATPELFELLSLEIQRRALGEIDIAALVSEILPQTIVFDAPKGKTPL
SQLDPHRLWLLSSGNTNFAIGDRLEPSPDKQILKVESGTARLVGIPPVSFQTTPITPTVI
VTEPEAETEDIPYASEQPPALEPSKAERIKYPYVSGNGVLNETLACFQMLSQYWDMPFRR
DVVRRVLQNQQQRLGSVSLQLCGSLAEMLGLRAQLAMVPAVAISRLETPVMLQWQNRFAV
LYQATEKELVLAVPGKGIQRHKTPEFVATWGQEGEILLLQQTQQTPRKRFGLSWFLPFVS
QYRRVLSEVLISSFFVQLFGLANPLITQVIIDKVLIQNSPSTLNVLGTLLVVTAVFEAIL
TTLRTNLFVETTNRIDMALGSEVIDHLLRLPLGYFEKRPVGELSTRINELENIRQFLTGT
ALTVVLDSIFSVIYIVVMVYYSWLLTLVALATVPLFALLGLIVAPIIRQQTRNRAERNAA
TQSYLVEVVSGIQTVKAQNIELRSRWQWQDRYAKYVADSFKNAITSTTAGSISKFLNQLS
GLLLLWVGAFLVLQGTLTLGQLIAFRIIAGYTTSPLLRLVQLWQNFQETALSLERLSDIL
DTPQEEPVPQDIPLPAIQGAVKYENITFRFTQSPSPQLDNISLEIAPNTFVGVVGQSGAG
KSTLTKLLTRLYDPEAGRILIDGYDIHKVELYSLRRQIGMVLQDTLLFDTTVKENIALNN
PEASSEEIIAAARVAYAHDFIMSLPMGYNTRVGERGSALSGGQRQRIAIARTVLQNPQLL
IMDEATSALDYNSERQVCQNLQQALKGRTVFFITHRLGTIRHADVILMMEDGRIAEKGTH
DELMAMRGLYYCLYRQQEAVVA
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttttacacctgctatttcccagttcttagagacaacgccaccctttaacctc
ttatccacttctgcgattgagcaactgacacaaaaagcacaactattgcgttaccgtatg
ggacacacaattgttgttaaggaaacaatgcctgctcatgtagcaattctttacgaagga
caagcccgactgattggatatacctataattcgcctgtaccggacaccttagaattactc
caaccaggggcaattctgggttgggtaagtttattgagaggagttgcttgtgaaactgcg
atcgcctcgatagaatcagtatgtctaactattccctctgttgattttcggacattactg
gaaaaagaaccagcctttaaggaagcgctaacaaaacgctgcgctaccccagaattattt
gaattattaagtttagaaattcagcgtcgtgccttgggagaaatagacattgccgcttta
gtctcagaaattctcccccaaaccattgtttttgacgcacccaaggggaaaacgcctcta
agtcaattagatccccatcgtctttggttgttaagtagtggtaatactaattttgccata
ggcgatcgcttagaaccatccccagacaaacaaatcctcaaggtagaaagcggcacagcc
cggttagtagggattcccccagtatcttttcaaaccaccccgattacacccacagttata
gtcacagaaccagaagcagaaacagaggatattccctacgcctcagaacaacccccagcc
ctagaacctagcaaagctgaacgcatcaaatatccttacgtgagtggaaatggcgtatta
aatgaaaccttggcttgcttccaaatgttgagccaatattgggatatgccctttcgtcgg
gatgtcgtgcgtcgagttttgcaaaatcagcaacaaagattaggcagtgtttccttacaa
ttatgcggttccttagcagaaatgttaggtttacgggcgcaattagcaatggttcccgcc
gtcgctatcagtcgcttagaaaccccggtgatgctgcaatggcaaaatcgctttgctgtg
ctttaccaagctactgagaaggaactggtgttagctgtaccaggaaaaggcatacaacgg
cacaaaaccccagaatttgtcgccacttggggacaggaaggagaaattctactcctacaa
caaacccagcaaactccccgtaaacgctttggtttaagttggtttttgccttttgtttcc
cagtatcgccgagttttgagtgaggttttaatttcttccttctttgtccagttgttcggc
ttggcgaaccctttgattacccaggtaattattgataaagtcttaattcaaaactcaccc
tcaacgttgaatgttttagggactttattagttgttacagcagtatttgaagcaattctg
acaactctgaggacaaatttattcgtagaaactaccaaccgcatcgacatggcgctgggg
tcagaagttattgaccacctgctgcgtctacctctgggttactttgaaaagcgccctgtg
ggtgaactctcaactcggattaatgagttagagaatattcgccaatttctcactggtaca
gctttaacagtggtcttagactcgatattttccgtgatctacattgtagtcatggtttac
tacagttggctattgactttggtagctttagccacagtaccattatttgcccttttaggt
ttaattgtcgccccaatcattcgccaacaaacccgcaaccgcgccgaacgcaacgccgct
actcaatcttatttagtagaagttgtttctggtattcagacagtcaaggctcaaaatatt
gaactgcgatcgcgttggcaatggcaagaccgttatgctaagtatgtggctgatagcttt
aaaaatgccatcacttctacaactgcgggttcaatcagtaaatttctcaaccaactctca
gggttattactgctttgggtcggagcatttttagtattacaaggaaccctcacactgggg
caattaatcgccttccgcatcatcgcaggttacaccacaagtcctctcctgcggctagtg
caactgtggcaaaacttccaagaaacagcactatctttggaaagattgagtgatatttta
gacacgccccaagaagaaccagtcccccaagatattcctttaccagcgattcaaggagca
gttaaatatgagaatatcaccttccgcttcacccaaagccccagcccgcagctcgataat
attagcttagagattgctcctaatacatttgtgggcgtagtgggacaaagtggcgctggt
aaaagcaccctcacaaaacttttaactcgtctgtatgaccccgaagctggacggattcta
attgacggctacgacatccacaaagttgaactttattctctgcggcgacaaatcggcatg
gtattacaagatacgcttttgtttgataccaccgttaaagaaaatatcgccctcaataac
ccagaagcctcctctgaagaaattatcgccgccgcccgtgtagcctatgctcatgacttt
attatgagcctgccaatgggctataacacccgtgttggagaacggggatcagccctttct
ggaggacaaagacaaagaattgcgatcgcccgcaccgtcctgcaaaacccccagttacta
attatggatgaagccaccagcgccctcgactacaacagcgaacgccaagtatgtcaaaac
ctccaacaagcactcaaagggcgcacagtctttttcattacccatcgcttaggtactatt
cgccacgctgatgtcatcctgatgatggaagacggtcgaattgctgaaaaaggcactcac
gacgaattaatggccatgagaggactttattactgcttatatcgccagcaagaagctgta
gttgcttga
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