Nodularia sphaerocarpa: BDGGKGIB_00893
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Entry
BDGGKGIB_00893 CDS
T08134
Symbol
rtpR
Name
(GenBank) Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase
KO
K00524
ribonucleotide reductase, class II [EC:
1.17.4.2
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00230
Purine metabolism
nsph00240
Pyrimidine metabolism
nsph01100
Metabolic pathways
nsph01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BDGGKGIB_00893 (rtpR)
00240 Pyrimidine metabolism
BDGGKGIB_00893 (rtpR)
Enzymes [BR:
nsph01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.4 With a disulfide as acceptor
1.17.4.2 ribonucleoside-triphosphate reductase (thioredoxin)
BDGGKGIB_00893 (rtpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_3
Intein_splicing
RNR-II_ins_dom
RNR_Alpha
Hom_end
LAGLIDADG_WhiA
Hint
Motif
Other DBs
NCBI-ProteinID:
ULP71268
LinkDB
All DBs
Position
complement(1096145..1100521)
Genome browser
AA seq
1458 aa
AA seq
DB search
MVRELERKRQSAEFPETAPAANPVFFRTYSRRTKAGLRETWDEVCDRTLQGIIELGKLNP
AEIAILENMQRNLKTLPSGRWLWVGGTDWVSKPKNFSGAYNCTSTNLQDWSAFGLMMDLA
MMGCGTGAVIEPQYINQLPPIRNYLNVTVNGDIGSTSPELRREYTQTEIEGNSVIIHVGD
SREGWVESYKSLLELSTDEQFTAEVQVVVDLSDVRQAGETLKGFGGVANPVKLPGLYQRC
VSILNKARGRQLNSVECCLLIDQAAVTIVAGNIRRSAGMRQFKADDEQGATAKDNLWQQD
ENGNWRIDPERDALRMANHTRVFHRKPTLEECVEAVRKQYYSGEGAIQWAGEAVARSNCD
LLPTQELKVDFLKSYEQGTAKEWLQAHYPDLDAKELEHRLARYGLNPCITADTWIHTELG
ARQVKDLIGKQLSVYVNGELFSTTTDGFWLTGVKPVFKVITQEGYELRLTGNHQLLKVTA
QTQKKQYTEWVETQDLHPGDSILVHNHRGVQPWESFGTFEQGWLLGSLIGDGSLAATQWG
KTAYLRYWEDTQDEMGRYAVTLLKKTVDFSGSTESGCYHQQLKHRVINSSSLARLAADYD
VTLENKIPTDKIEQASYEFYRGFLRGLFDADGSVQGNQQKGVSVRLAQSNLETLKRVQRM
LSRLGIISTIYQERRPESYRHLPDSNREPALYLCQAQHELVIANDNISSFQTIVGFQEPK
KAARLEELCGQYKRKLNRERFSVKITEIVPDGVEAVYDCTVPGVSRFDANGIVAHNCGEI
IGSNFHCVSGDTLLITRDGIHKIEDVVGCEVEIWNGEKWSQVKPFQTSSDSPLYRVRFGD
GTYLDVTEYHRFFVKDRFGKTYKEVQTKDLMDTSKYSIHTEPFTIQYDDGLSIDVSYAYT
LGAAVGDGTTDQNDNAKIRLYGKKAALSVAGNKSATREYDYLPSFTDATNLGFSGEFLKS
LKTNPEALNVIASWNRAAILHFLAGLADTDGSNTNSNGIRIYISDYERAYRVQLLLTKCG
IRSSLNLCAHQGAVTNYGVRSKDLYYLQITDCGEIPCQRLDVSKGTNAKCKGKWQVVKGV
EQLPGLHNTYCFNEPEYHKGVFGNTLTGNCNLAEIHLNQIDPKNFKEQEEAFTAGALSVA
ALLNHQFLEPRYQESRELDPIVGVSFTGLFDFFVHAFGVDWLHWWSEGRPETPQGLAFKQ
EEQKYLTFWKDTVHRVVWEYCDRHQIKRPNRCTTVQPSGTKSLLTGASSGWHPPKAQRFI
RRITFGKNDPVALACIDYGYSVIPSQSDKDEQGNLLNDPFDPRVSEWLVEIPVAVSWADV
PGADQIDVSQFSVLAQFDFVLQVQRWYVTHNTSATLELRSEEVEGLGQKIYETIQNDQGY
ISAALLARFDDLQSFPRLPFEPIDKLTYERLSQEVKGRRNTDDFCAVLSRYDSGELTEAG
PSGCDSDKCMFPDQGPMS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagttagaaagaaaacgtcagagtgcagaatttccagaaaccgcgccagca
gcgaatcctgtattttttagaacctacagccgccgtacaaaggcagggctgagggaaaca
tgggatgaggtatgcgatcgcaccctccaaggcatcatcgagttagggaagctcaaccca
gccgaaattgccatcctagagaatatgcaacgaaacctcaaaaccttacccagtggccgc
tggttatgggtaggtggtacagactgggttagcaaacccaaaaacttttccggggcttat
aactgcacctccaccaacctgcaagactggagtgcctttgggttgatgatggatttagcc
atgatgggctgtgggactggagccgttatagaaccgcaatatattaatcaattacctccc
atccgcaattacttaaatgtgacggtaaatggagatattggtagcacatctccagaatta
cgtcgtgaatacacccaaaccgagatcgaaggtaacagcgttattatccatgtgggagat
agccgggaaggttgggtagaatcctataaaagcttattggaactttccacagatgaacaa
tttacagcagaagtgcaagtagtcgttgatctgagtgatgttcgtcaagcgggagaaact
ctcaagggctttggaggggtggctaatcctgtcaagttgccaggactctatcagcgttgt
gtatccatcctcaataaagccagaggacgacaattaaattcagtggaatgctgtttgtta
attgaccaggctgcggtgacaattgttgcaggaaatatccgtagaagcgcgggcatgaga
cagttcaaggcagacgatgaacaaggcgcaactgccaaagataacctctggcaacaggat
gaaaatggcaactggcgtattgatcctgagcgtgacgctttacggatggccaaccataca
agagtgtttcaccgtaagcccacattagaagaatgtgtagaagctgttcgtaaacaatac
tacagtggcgaaggtgcgattcaatgggctggtgaagcagtagctcgatccaattgtgat
ttgctaccaacacaagagttaaaagttgatttcttgaaatcctatgaacaaggaacagca
aaagagtggttacaagcacactatccagatttagatgccaaagaactagaacatcgttta
gctcgttacggattaaatccttgtattactgctgacacttggattcacactgaattaggt
gcgcgacaagtcaaagacttgataggcaaacaattgagtgtatatgtcaatggcgaatta
ttcagcactacaaccgatggcttttggttgacaggagtaaaacctgtatttaaagtgatt
actcaagaaggctatgaattgcgtttaacaggcaatcatcagctactgaaagtaacagcc
caaacccagaaaaagcaatacaccgagtgggtagaaactcaagatttgcaccctggcgat
tctattttggttcataaccatcgtggagttcaaccttgggaaagctttggtacttttgag
cagggttggttgctgggtagtctgattggcgatggtagccttgctgcaacacaatggggt
aaaacagcctatctccgatattgggaagacacccaagacgaaatgggcagatatgctgta
actttactcaaaaagactgttgatttttcaggttccacagaatcgggctgctaccatcaa
cagctaaaacatcgagtcatcaattcatcaagcttggctcgattggcagcagattatgat
gttaccttagagaacaaaatacccacagataaaattgagcaagccagctatgagttttat
cgtggctttttgcgtggcttgttcgatgctgatggcagtgttcaaggtaatcaacaaaaa
ggtgttagtgtcagactggcacaaagcaatcttgaaactttgaagagagttcaaagaatg
ctgtcccgcttggggattatttccaccatttatcaagaacgtcgtcctgaaagctatcgt
catcttcctgatagtaatcgtgaaccagctttatatctctgtcaggcacagcatgaactg
gtgattgctaatgataatatctcttctttccaaacaatcgtgggatttcaggagccgaaa
aaagctgcacgcttagaagaattatgcggtcaatacaaacgaaagctaaatcgtgagcgt
ttttcagttaaaatcacagaaattgtgccagatggtgtagaagcagtttatgactgtact
gtgcctggagtttctcgatttgatgctaacggcattgtggcacacaattgtggtgaaatt
atcggctctaacttccattgtgtcagtggtgataccttactaatcactagagatggaatc
cacaaaattgaagatgttgtgggctgtgaagtagaaatttggaatggtgaaaaatggagt
caagtcaaaccatttcaaacaagtagcgattctcccctgtatcgtgtgcgatttggagac
ggtacatatttagatgtgactgagtatcaccgcttctttgttaaagataggtttggcaag
acttacaaggaagtacaaacaaaagatttgatggatactagcaaatatagtattcacact
gagccgtttacaattcagtacgatgacggattgagtattgatgtcagctatgcttacact
ctaggcgcagctgtcggagatggcacaacagatcaaaatgacaatgccaaaattaggtta
tatggcaaaaaagcagctttatctgttgcaggaaataaatctgcaaccagagagtatgac
tacttacctagttttacagatgctacaaacttaggtttttctggggaatttctcaaaagc
ctgaaaacaaatccagaagccttaaatgtcattgctagttggaatcgtgccgcaatttta
cattttctggctggtttagctgatacagatggctcaaatacaaacagcaacgggatcaga
atttatatctctgactatgaacgagcataccgagttcagttactactaactaagtgtggt
attcgttcatctttgaatctttgcgcgcatcaaggggctgtgactaactatggtgttaga
agcaaagatttatactacttgcaaataactgactgtggggagattccttgtcagcgattg
gatgtaagtaaaggtacaaatgccaagtgcaaaggtaaatggcaagttgtcaagggtgtt
gaacaattgccaggattacataatacttactgctttaatgagccggagtatcataagggc
gtttttggtaatacactcaccggaaactgtaatcttgcggagatacacttaaatcaaatt
gatcccaagaactttaaagaacaagaggaggctttcacggctggggcgttatctgtagca
gcacttttaaatcatcaatttttagaaccccgctaccaagaaagccgggaattagatccg
attgtgggggtttctttcaccggtttatttgatttctttgttcatgcttttggtgttgac
tggctgcattggtggtcagaaggaagaccggaaactccccaaggattagcctttaagcag
gaggaacagaaatatttaaccttctggaaagatacggtgcatcgagttgtgtgggaatat
tgtgatcgccatcaaatcaaacgacccaatcgctgtactacagtccaacccagtggcact
aaatccttgctcacaggcgctagttctggctggcatccccccaaagcccaaagatttatt
cgccgaatcacttttggcaaaaatgaccccgtagccctagcctgcattgactatggttac
agtgtaatcccctcccaatctgacaaagatgaacagggtaacttgttaaatgatcccttt
gacccccgcgttagtgaatggctggtagaaatccccgtagctgtatcttgggctgatgtc
ccaggagccgaccaaattgatgtttctcaattctctgtactagctcaatttgattttgtc
ctgcaagttcagcgctggtatgtgactcacaacacatcagcaaccttagaattgcggtct
gaagaagttgaaggactgggacagaagatttacgaaaccatccaaaatgatcagggttat
atttccgccgcacttttagctcggtttgacgacttgcaatcattcccccggctaccattt
gaacccatagacaaactcacctatgagcgtttaagtcaagaagtgaaagggcgacgcaac
acagatgatttctgtgcagttctcagccgctatgattccggagagttaacagaagctggc
cccagtggctgtgactcagacaagtgtatgtttcccgaccaggggccaatgtcctaa
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