Nodularia sphaerocarpa: BDGGKGIB_01335
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Entry
BDGGKGIB_01335 CDS
T08134
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nsph
Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsph03021
]
BDGGKGIB_01335 (sigB)
Transcription machinery [BR:
nsph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDGGKGIB_01335 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_23
HTH_24
Sigma70_ECF
HTH_3
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ULP71702
LinkDB
All DBs
Position
1630665..1631450
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AA seq
261 aa
AA seq
DB search
MATGESSMRTDGMELLHSYHQNPSIKLRNQLVQLHTGLVRKIAHKFSHQCHEPYEDLEQI
GYFGLIRAIERFDPSQGYAFSSFAVPYIRGEMLHFLRDRSSLLKIPRRWQELYNDGQRVR
KELAASLGRSPRDAEIAQKLQVSVQEWQETKLAAQNRMPLSLDATAVHYVDCQITLGEAL
ACPRSSVLQQQDEERQQLQGAINMLEDKPRMAVEMVFLRELSRKDAAKNIGTSPMTVTRY
LQKGIQDLICYLQPQTVPTGS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggtgaatcctctatgcgaactgatggtatggagttattgcactcataccac
caaaatccctctattaaacttcgtaatcaacttgtacagttacatactggcttagtcaga
aagattgctcataaattcagtcatcaatgtcatgaaccttatgaagatttagaacaaatc
ggttattttggtttaattagggcaattgaacgcttcgaccctagccaaggatatgcgttt
agttcctttgctgtgccatacattcgaggtgagatgttgcactttttacgcgatcgcagt
agtctattaaaaatcccccgccgttggcaagaactgtacaacgacggccaaagagttcgc
aaagaattagcagcttctttgggtcggtctcccagagatgcggaaattgcacagaaactg
caagtctctgtacaagaatggcaagaaactaaattagcagctcaaaatcggatgcctttg
agtctagatgctaccgcagtccattatgtggattgccaaatcacactgggtgaggcgctt
gcttgtcctcgttctagtgtccttcagcagcaagatgaagaacggcaacaactccaaggg
gcaatcaatatgctagaagacaagccccgaatggcagtggaaatggtgtttttaagagaa
ctttctcgcaaggatgcggcgaaaaatattggcaccagtccgatgacagtaacgcgatat
ttgcaaaaaggcattcaggatctaatttgctatttacaaccacaaacagtgccaacaggg
tcttag
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integrated database retrieval system
