Nodularia sphaerocarpa: BDGGKGIB_01429
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Entry
BDGGKGIB_01429 CDS
T08134
Symbol
cpcF
Name
(GenBank) Phycocyanobilin lyase subunit beta
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00196
Photosynthesis - antenna proteins
nsph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
BDGGKGIB_01429 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
nsph00194
]
BDGGKGIB_01429 (cpcF)
Enzymes [BR:
nsph01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
BDGGKGIB_01429 (cpcF)
Photosynthesis proteins [BR:
nsph00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
BDGGKGIB_01429 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
Cnd1
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
ULP71795
LinkDB
All DBs
Position
complement(1735479..1736075)
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AA seq
198 aa
AA seq
DB search
MTDELIRAVAQADTPANMVTAVQNLAAAKDVAAIPTLIAVFGYNNPSAATVAAAALTEMG
EIAVPQLLSQIDDYNYGARAYSIRTLAAIADPRAIDVLITAAATDFAPSVRRAAAKGLGN
LNWHKLESADRQTALNKALETLLFISQDSEWSIRYAAVVGLQALAKIPDLQQPIQTRFDQ
MLATDDEKAIRARVQLAI
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaattaattcgtgccgtcgcccaggcagatacaccagccaacatggtaacg
gcagtacaaaacttggcagcagcaaaggatgtcgccgctattcccacattaattgcggtg
tttggttataacaacccatccgcagcgacggtggcggcggcagcattgaccgaaatggga
gaaatagcagtaccacaattgctatcccagatagacgattataactatggcgcacgggct
tattcgattcgtactttagcagcgatcgcagacccccgtgctattgacgttttaatcaca
gccgcagccacagactttgctcccagtgtccgccgtgctgctgccaagggattgggaaat
ttaaactggcataaactcgaatctgctgacaggcaaacagcgctgaacaaagcattggaa
accctgctgtttatttctcaagactcagaatggtcaatccgttatgctgctgttgtaggt
ttacaagccttggcgaaaatacctgatttacagcaacccattcaaacgagatttgaccag
atgttagccactgatgacgaaaaagcaattcgcgctcgtgtgcagctggctatttaa
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