Nodularia sphaerocarpa: BDGGKGIB_01767
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Entry
BDGGKGIB_01767 CDS
T08134
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nsph
Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsph03400
]
BDGGKGIB_01767 (sbcC)
DNA repair and recombination proteins [BR:
nsph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BDGGKGIB_01767 (sbcC)
Archaeal homologous recombinant proteins
BDGGKGIB_01767 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_27
AAA_29
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ULP72129
LinkDB
All DBs
Position
2174250..2177276
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACICGSNGAGKSSLLEAITWAIWGESRAGVEDDV
IHSGAKEVRVDYIFQCNQQKYRVIRTRVRGASGVLEFQIETASGFRALTGKGVRATQDVI
LEHIKLDYDTFINSAYLRQGRADEFMIKRPSERKEILAELLKLNQYDQLEERAKESSRQF
KARAEELERSLESSQIQLQQQEATQAQKTELETELNQLQQVQAFENIQLQSLQVVQHQRQ
NWQQQLNFVKQQHQNLTQDGDRLQQEQSAVQSQLSDLQTILNQETEIQTGFTQYQTLQAQ
EEAFATKFQEYTRATALLQQKQQQLTSQIHELERQLQQVQGQLLALEQQEPEIQHTLNKS
GEVEAALTQLTAARRRVTELDELQMQVSPLLQQQQNLQSQLDKVHAGLVARLEQLQATEN
QLQRSSKRQPQLQQAARDLEIQISQMEKDKVYLQRVQEKGQERRHFMERLQAQQREYERL
LGELEQKLEMLRTPDAKCPLCERPLDEHHWNRVVDKTKDEYQDTEGQLWVFREQKAVSDR
EIQVLRQEYREILQKLSPYDTLREQRGQLAAQLQSTSDAQQQLEELAAEKQHLERSLQMG
DYASDKQAELRQLEEYLQQLNYNEQDHALARSEVERWRWAEIKQGQIKDAAKRQAQIAAR
KPELQATISQLQTHIQQDQIDSDCAKEITELQRQIGEMGYSSEEHNSLRLAVREAQSWQL
RYQQLLSAQQQYPQLQKRWQDLEVSRSERLDERQKLVTQIESLTQELAKSANPTEEINVL
EQQIQIRRRQLDEKIANLGRLEQLMLQLETLEKQHEQQQQQLKSCKQEQRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFITQKSGRSSKAKKKDAKLIDTLDI
LIADSRGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIIDEGFGTQDAEGCD
RLIASINAIACDFACILTVTHMPHLKEAFQARIEVHKTQEGSQVSLSI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtacaacttatcctcaaaaacttcctcagttaccgtgatgcaactttagat
tttcgcggtttgcatacggcttgtatttgtggttctaatggtgcgggtaaatcttctctt
ttagaagcaatcacatgggcaatttggggtgaaagccgtgccggtgttgaagatgatgtc
attcattcaggtgcaaaagaagttcgggttgattatatttttcaatgtaatcagcaaaaa
tatcgggtaattcgcaccagagttcgaggtgctagtggtgtcttagaatttcaaatagaa
acagcttctgggtttcgcgccttgactgggaaaggagttagagctacacaggatgtgatt
ttagaacacatcaaacttgattacgatacttttattaattctgcctacttgcgtcaaggt
cgtgctgatgagttcatgatcaagcgtcccagtgaacgtaaggaaattttagcagaatta
ttaaaacttaatcaatatgatcaattggaagaacgggctaaggagtcatctcgtcagttt
aaggctagggcggaagagttagagcgttctctggagtcgagccaaattcagttacaacag
caagaagcaacacaagcccaaaaaacagagttagaaactgaacttaaccaactgcaacaa
gtccaagcttttgagaatattcagttacaaagtttgcaagttgtccagcatcaacgtcaa
aattggcaacaacaactgaattttgtcaagcaacaacatcaaaatttaactcaagatggc
gatcgcctgcaacaagaacagtcagcagttcaaagtcagctatcagatttacaaaccatt
ttaaatcaggaaactgaaattcaaactggttttacacaatatcaaactctccaagctcaa
gaagaagcttttgcaactaaatttcaagaatacacccgtgcaaccgcattacttcaacaa
aagcaacagcaattaacaagccaaattcacgaacttgaaagacaactgcaacaagttcaa
ggacaattactcgcattagaacaacaagagccagaaattcagcacacacttaataaatct
ggtgaagtcgaagcggctttaactcaacttaccgcagcccgtcgccgtgtgactgaatta
gatgaactgcaaatgcaagtttctcctttattgcaacaacagcaaaatctgcaaagtcaa
ctggataaagttcatgctggtttagtagcacgtcttgaacagttacaagctacagaaaac
caactacaacgctcttcaaaacgtcaaccgcaactacaacaagcagcgcgagacttagaa
attcagatttcgcaaatggagaaagacaaagtttatctgcaacgagttcaggaaaaaggc
caggaaagacggcattttatggaacgtctgcaagctcaacaacgggaatatgaaagatta
ttgggcgaattggagcaaaaactcgaaatgctccgcactcccgatgcaaaatgtcctttg
tgtgagcgtcctttagatgaacatcactggaatcgtgtggtggataaaactaaagacgag
tatcaggatactgaagggcaattgtgggtattccgagaacaaaaagccgtttcagaccga
gaaattcaggtactcaggcaggaatatcgagaaatattgcaaaagttatcaccgtatgat
accctaagagaacaaagaggtcaattagccgcacaactgcaatctaccagtgatgctcaa
caacagttagaagaactggctgcggaaaagcaacatttagagcgatcgctgcaaatgggt
gattacgcctcagacaaacaagcggaattgcgacaattagaagaatatttacaacaactg
aattataatgagcaagaccatgctctggctagaagtgaagtagagcgttggcgatgggcg
gaaattaaacaagggcaaattaaagacgcagctaaacgacaagctcaaatagccgctcgg
aaaccagaattacaagcaactatttctcagttacagactcacatccagcaggatcaaatt
gattctgactgcgctaaagaaattacagaacttcagcgtcagattggggaaatgggttac
agttccgaggaacataacagcctgcgcctagctgtacgcgaagcccaatcttggcaatta
cgttatcaacaacttttgtcagcccagcagcagtatccacaactccagaaacgatggcaa
gatttagaggtttccagaagtgagagattggatgagcgccaaaaactggtgactcaaatt
gagagtctgactcaagagttagcgaaatcagctaaccccactgaggaaattaatgtttta
gagcagcaaattcaaattcgcagacgacaacttgatgaaaaaatcgcaaatttggggcgt
ttagaacagttgatgctgcaattagaaactctggaaaaacagcatgagcaacagcagcag
caattaaaatcttgtaagcaggaacaacgagtttatcaggaattagcccaggcgtttggt
aaaaatggcatccaagcattgatgattgagaatgtgttacctcaactggaagctgagaca
aatcaactgttatcgcggttgagtgctaatcaattgcacgtacaatttattacgcagaaa
tctgggcggagtagtaaggctaagaagaaagatgcgaagctgattgatacgttagatatt
ttaattgctgattctaggggaacgcgagcttatgagacttattctggtggggaagctttt
agaattaactttgctatccgtttagccctggcgaaattattggctcagagagcgggtgcg
gctttacaattgttaattatcgatgaaggctttggtactcaggatgcggaaggatgcgat
cgcttgattgcttccataaatgcgatcgcttgtgatttcgcttgtatactcactgtaacc
catatgcctcacctcaaagaagcctttcaagctcgcatagaggttcataaaacccaggaa
ggttctcaggtaagtttgtccatttaa
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