Nodularia sphaerocarpa: BDGGKGIB_01980
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Entry
BDGGKGIB_01980 CDS
T08134
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph02024
Quorum sensing
nsph03060
Protein export
nsph03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BDGGKGIB_01980 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BDGGKGIB_01980 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BDGGKGIB_01980 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nsph02044
]
BDGGKGIB_01980 (ffh)
Enzymes [BR:
nsph01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BDGGKGIB_01980 (ffh)
Secretion system [BR:
nsph02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BDGGKGIB_01980 (ffh)
Eukaryotic Sec-SRP protein
BDGGKGIB_01980 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
ArsA_ATPase
AAA_33
ParA
nSTAND3
AAA_16
6PF2K
ATPase
AAA_24
APS_kinase
AAA_19
ResIII
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ULP72341
LinkDB
All DBs
Position
2415042..2416511
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AA seq
489 aa
AA seq
DB search
MFDALSDRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKNFISEVETKAQ
GADVVAGVRPDQQFIKIVHDELVRVMGAENVPLAQTEEKPTIVLMAGLQGTGKTTATAKL
ALHLRKLDRSCLLVATDVYRPAAIDQLVTLGKQINVPVFDLGSDADPVEIARQGVERARA
EGFNTVIIDTAGRLQIDEDMMGELAQIKATVQPHETLLVVDSMTGQEAANLTRTFHEKIG
ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPERMASRILGMGDVL
SLVEKAQEEFDLADAEKMQEKILSAKFDFNDFVKQLRMLKNMGSLGGIMKLIPGMNKISD
EQLKQGETQLKRCESMINSMTRQERQDPDLLASSPSRRRRIAKGSGYREPDVSKLVGDFQ
KMRTLMQQMGQGQMPAGMPGMFGGGGMGNPFGGGDNRPSSPGWRGYNTGDRTTKKKKNKE
KKKKGFGTL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgctttatctgaccgtttagaaagtgcctggaagaaactacggggacaggac
aaaatatctcaatccaatattcaagacgctttgcgggaagtgcgccgcgccttgttggaa
gcagatgtcaatctccaggtagttaaaaattttatcagcgaagtcgaaaccaaagcccaa
ggtgctgatgtcgtggctggtgtgcgacctgaccaacaattcatcaaaattgttcacgat
gaattggtgcgggtgatgggggcggaaaatgttcccttagcccaaacagaggaaaagccc
acaatcgttttaatggctgggttgcaaggtactggtaaaaccacagccactgctaaatta
gccttacatttaagaaaattagatcgtagctgtttgttagtcgcaacagacgtatatcgc
ccagccgctattgaccaactggtaacgttaggtaagcaaattaacgtgccagtttttgac
ctgggaagcgatgccgacccggtagaaattgcccgtcaaggtgtagaacgtgccagagca
gaaggttttaatacggtaattattgacacggctggtcgtctgcaaattgacgaagacatg
atgggggaattagcccagattaaagccactgtccaacctcatgaaactttgctagtcgta
gactctatgactgggcaagaggcagcaaatctgactcgcacctttcatgaaaaaatcggc
attaccggggcgatactgactaaattagacggtgatagccgtggtggtgcggcgctgtca
gtcagacaaatttcaggagcgccgattaagtttgtgggtgtaggcgagaaagtcgaagca
ctgcaacctttttatcctgagcgcatggcatcccggattctgggcatgggtgatgtgctt
tccctcgtggaaaaagcccaggaagaatttgatctagcagatgccgagaaaatgcaggag
aaaatcctgtccgccaagtttgactttaatgattttgtcaaacaattgcggatgctgaaa
aatatgggttcactgggaggcatcatgaagttgattcccggaatgaacaagatttccgat
gagcaattgaagcagggcgaaactcagcttaagcgctgcgagtccatgattaactccatg
actcgccaagaacgccaagaccctgatttattagcaagttctcccagtcggcggcggcgc
attgctaaaggttctggttacagagagccggatgtgagtaagctagtgggagacttccaa
aaaatgcgaactctcatgcagcaaatgggtcaaggtcaaatgccggcgggaatgcctgga
atgtttggcggtggcggcatgggtaatccttttggcggtggtgataatcgtccttcctcc
cctggctggcggggttataatacaggcgatcgcaccacgaagaagaaaaagaacaaagag
aaaaagaaaaagggcttcggcactctgtag
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