Nodularia sphaerocarpa: BDGGKGIB_02111
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Entry
BDGGKGIB_02111 CDS
T08134
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nsph
Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsph03400
]
BDGGKGIB_02111 (radA)
DNA repair and recombination proteins [BR:
nsph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BDGGKGIB_02111 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
NTPase_1
nSTAND3
AAA_22
GvpD_P-loop
NACHT
Lon_C
DZR
AAA_5
ABC_tran
AAA_14
MCM
AAA_24
DUF7125
AAA_18
ATPase_2
AAA_29
PAXNEB
zf-RING_10
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ULP72468
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Position
2573100..2574668
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AA seq
522 aa
AA seq
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MAKPKTSFVCNACGAESSQWFGKCPACGTYNSLEEQISIQSSVDVPSRGGVSNWQTTQGN
GKPAHKPAKARASLTFDQITDRQIARWESGYGELDRVLGGGIVPGSMVLIGGDPGIGKST
LLLQVSNALAQRYRILYVTGEESGQQVKLRASRLGVSKHTDLSSEENEDHAENGKVEGDL
EVKALSSEEIEEGKNADLYVLPETDLEEILREIDSLRPNLAVIDSIQTVFFPALTSAPGS
VAQVRECTSALMKVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRL
LRTVKNRFGATHEIGIFEMVEHGLREVSNPSELFLGNRDDPAPGTAIVVACEGTRPIVVE
LQALVSPTSYPSPRRAGTGIDYNRLVQILAVLEKRVGIPMSKLDSYVASAGGLSVAEPAV
DLGIAIAIVASFRDRIVDPGTVLIGEVGLGGQVRSVSQMELRLKEAAKLGFKRAIVPKGQ
KYPDYNIEILPVSKVIDAIIAAIPHQTLEASDLELDDEDDEE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctaaaacctctttcgtttgtaacgcctgtggagcagaatcttctcaatgg
tttggcaaatgtccagcctgcggtacttacaactccttagaagagcagatttctatccaa
tcatcggttgatgtaccatctaggggaggagtcagcaactggcaaacaactcaaggtaat
ggcaaacctgctcataaaccagccaaagcacgagcttcgctaacatttgatcaaattaca
gatcgccaaattgctcgctgggaatcaggttatggtgaactagatcgggtgctgggaggg
ggaattgttcccggttcgatggttctgattggtggtgatcctggaattggtaaatctacg
ctactgttacaggtatcaaatgcactggcgcagagataccgtatcctctacgtaactggg
gaagaatcaggacaacaggtcaaattacgagcttctcgcttgggagtatcaaagcatact
gatttgtctagtgaggagaatgaagatcatgctgagaatggcaaagtagaaggagattta
gaggtaaaagctctgagttcagaagaaatcgaagaaggtaaaaatgcggatttgtatgta
ttacccgaaacagatttagaagagattttacgagagatagattctctcagaccgaattta
gcagtaattgatagtattcaaacggtgttctttccggcactaacttctgcaccgggttct
gtagcccaagtcagggaatgtacctcagctttgatgaaggtggcaaagcatgaagatatt
accatgttaattgtgggacacgtgaccaaagaaggtgcgatcgcagggccgaaagtttta
gaacacttagtagatacagtattgtactttgaaggcgatcgctttgcctcccatcgatta
ttaagaacagtaaaaaaccgttttggtgcaactcacgaaatcggcatctttgaaatggtg
gaacacggactgcgagaggtttccaacccttcggagctatttttaggcaatcgtgatgat
cctgcaccggggacagccattgttgtagcttgcgaaggaactcgccccattgtggtagaa
ttgcaagctttagttagtcctaccagttacccttctccccggcgtgcgggtacaggtata
gattataaccgcctcgtgcagattctcgccgtcttagaaaaacgcgtcgggattcccatg
tcaaaactagattcttacgtcgcctcggctggtgggttgagtgtagcagaaccagcagta
gatttaggaattgcgatcgccattgtagcgagttttcgcgatcgcatagttgatccaggt
acagtattaattggtgaagtcggcttaggcggacaagtgcgctcagtgtcccaaatggaa
ctacgattaaaggaagcagccaaactgggatttaaaagagcgatcgtacccaaagggcaa
aaataccccgactataatatagagattttaccagtttccaaagtaatagatgcaattatc
gctgctatcccccaccaaaccctagaagccagcgacttagaactagacgacgaagacgac
gaagaataa
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