Nodularia sphaerocarpa: BDGGKGIB_02238
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Entry
BDGGKGIB_02238 CDS
T08134
Symbol
lytC_2
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase LytC
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
BDGGKGIB_02238 (lytC_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
BDGGKGIB_02238 (lytC_2)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsph03036
]
BDGGKGIB_02238 (lytC_2)
Enzymes [BR:
nsph01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
BDGGKGIB_02238 (lytC_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
Peptidoglycan biosynthesis and degradation
Amidase
BDGGKGIB_02238 (lytC_2)
Chromosome and associated proteins [BR:
nsph03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BDGGKGIB_02238 (lytC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
SH3_3
SH3_4
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
ULP72594
LinkDB
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Position
complement(2732673..2734427)
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AA seq
584 aa
AA seq
DB search
MRLLIGLIILGSLTTPSLAWAQENTLKIVYPPTNHQTNTDKIFLLGTAPPTGQVLINNQP
IKRSKSGHFTPSFPLEVGENLFTVRYQNQEIQMQVTRVDNQSKIPQGLAFVEDSLTPKVD
ISRLPGEEICFSAMASPNANLNVRLGEQTVKLSPQPKQISLPSNSAIYIDGKNQPITQIV
PGKYQGCTTLARLEDGEKPEFQLTLNNQTITQFSSGQIQTLSPAKLPVVEIIAEAGVART
GPSTTDSRLTPLPQGVRASVTGKEGDWLRLDYGGWIHSQETRMIPGAIPPRSMIRSIISR
ELPKTTEIVFPLQVPVPISVEQGDKTFTLTLHNTTAQTDTIRLDDNPLISRLDWQQIAPD
KVQYTFNLKKAQQWGYNLQYRDTSLVLSLRHSPVISRRQTQPLSGIKILLNAGHGGEELG
AAGPTGYLAKDLNLVVTKLLRDELRRRGATVVMAREDDRDLSLVERQKMIDQNQPAMSLT
FHYRFLADDGDAENTQGVSSYWYHPQAHSLAVLLQNRLVQNLGRSSFGVYWNNLALTRPH
SAPSVLLELGFMSNPEDFELAMDVQEQRRLARVLAEGVVEWFQK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttacttattggattaatcattctcggttctctgacaactcccagcctagcttgg
gcgcaagaaaacacgctgaaaatagtttatccgccaacgaatcaccaaactaatacagat
aaaatattcctcctggggactgcaccaccaacgggacaagttttaataaataatcaaccc
attaagcgcagtaaatctggacattttactcctagctttccgttggaggtgggagaaaat
ctgtttactgtacgttaccaaaatcaagaaattcaaatgcaggtaacgagagttgataat
caatcaaaaataccccaaggattagcctttgtcgaagattccctgactcctaaagttgat
atttctcgactaccaggagaagaaatttgttttagtgcgatggcttcgcccaatgctaat
ttaaatgtaagattgggagagcaaactgttaaactatcaccgcaaccaaaacaaatatct
ctacccagtaattcagccatatatatagatggtaaaaatcaacctatcactcaaattgtc
ccaggtaaatatcagggatgcacgacattagcaagattagaagatggggaaaaaccggaa
tttcaattaactctcaataatcaaacaataactcaattcagttctggtcagattcaaacc
ctgtcaccagccaaacttccagtagtagaaatcatagctgaggctggtgtggcgcgcaca
ggtcccagtaccactgattcacgcttaacgcctttaccccaaggtgtgagagcatctgtt
acaggtaaagaaggtgattggttacgtttagactatggaggttggattcatagtcaagaa
actcggatgattccaggcgcaattccaccacgctcaatgattcgcagtataatttcgcgg
gaattaccgaaaacaacagaaatagtctttcctttgcaagttcctgtaccgataagtgta
gaacagggagataaaacttttaccctgactttgcataacaccactgcccaaacagacaca
attcgcctggatgataaccccttaatttctcgtctggattggcagcaaatagctcctgac
aaggtgcaatatacttttaacctcaaaaaagctcaacagtggggatataacctgcaatac
cgagataccagcttagttttgagtttgcgtcattctccggtcatttcccgcagacaaaca
caacctttatctgggataaaaattctgctgaacgccggacatggtggggaagaattaggc
gcagcaggaccaacaggttatttagcgaaagatttaaatttggtagttacaaaactgttg
cgggatgaattgagacgacgaggtgcaacagtggtgatggctagagaagatgaccgggat
ttgtctttggtggaacgtcagaaaatgatagatcaaaatcaacctgcgatgtcactgact
tttcattatcgatttttggctgatgatggagatgcggaaaatacgcagggagttagcagt
tattggtatcatccccaagcgcacagtttagctgtgttgttgcaaaatcgcttagtgcaa
aatttaggtaggtcttcttttggggtgtattggaataatttagcgctgacacgtccccat
tctgcgccatcggttttattggagttgggttttatgagtaaccctgaagattttgaactg
gcgatggatgttcaggaacaaaggaggttagcgagggttttggctgagggtgttgttgag
tggtttcagaaatga
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