Nodularia sphaerocarpa: BDGGKGIB_02646
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Entry
BDGGKGIB_02646 CDS
T08134
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDGGKGIB_02646 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsph03021
]
BDGGKGIB_02646 (rpoA)
03400 DNA repair and recombination proteins [BR:
nsph03400
]
BDGGKGIB_02646 (rpoA)
Enzymes [BR:
nsph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDGGKGIB_02646 (rpoA)
Transcription machinery [BR:
nsph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BDGGKGIB_02646 (rpoA)
DNA repair and recombination proteins [BR:
nsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BDGGKGIB_02646 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ULP72994
LinkDB
All DBs
Position
3172885..3173832
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNTEESRSHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEILMKMKEVILRSYSSQPQIGRLLVNGPATVTVAHFDLPSEVEV
IDQTQYVATLAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSV
EEARGESSITKDRLLLEVWTNGSISPQEALSSAAAILVELFNPLKDISLEPTETGAEVPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDFTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPQERGTKHT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagagtctaatactgaggaaagtcggagccattac
agtaaatttgtgctggaacctctagagcgtggtcaaggaacaacagttggcaacgcgctg
cggcgggttttactgtcgaatctagaggggacagccgttacagcagtgagaattgccggt
gtcagccacgagtttgctacagttcctggtgtgcgggaagacgtgctggaaatcctcatg
aaaatgaaggaagtaatcctcagaagctattcttctcaaccccagattggcagattactc
gttaatgggccagcaacagtcaccgtggctcattttgatttgcccagtgaagtagaagtc
atcgaccaaacccagtatgtcgctaccttagctgagggcggcaaactggaaatggaattt
cggattgagaaaggcaaaggatatcgcacagtagagcgaggacgcgaagaagccacttcc
ctggactttctgcaaattgactcggtatttatgccagtccggaaagttaactacagtgtc
gaagaagcccgtggtgaaagctcaattaccaaagacagacttctgttagaagtttggaca
aatggcagtatttcgccccaagaagcgctatcatcagcagctgctattctggtagagcta
ttcaatccattgaaagatatttcactggaaccaacagaaacaggcgctgaagtcccagac
gaccccactgcccaaattcctattgaagagttgcaactttctgtgcgggcttataactgc
ctcaaacgcgcacaagttaactctgtggctgatttattggatttcactcaagaagacttg
ttagaaattaaaaactttggtcagaagtcagcagaagaggtagttgaagccttacagcgc
cgtttaggtattactctgccccaagaaagaggcactaaacacacataa
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