Nodularia sphaerocarpa: BDGGKGIB_02707
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Entry
BDGGKGIB_02707 CDS
T08134
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00550
Peptidoglycan biosynthesis
nsph01100
Metabolic pathways
nsph01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDGGKGIB_02707 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BDGGKGIB_02707 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
BDGGKGIB_02707 (mrdA)
Enzymes [BR:
nsph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BDGGKGIB_02707 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BDGGKGIB_02707 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ULP73054
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Position
complement(3231279..3233087)
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AA seq
602 aa
AA seq
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MTLWQTSPLGGEKNTRTVGRNLQPVFLIAFTLLMTTGIGIRLAYLQIVEGAHHRSKAEAN
RLRIISKQPERGNIFDRNGKLLASTRSPRSVYLWPMAHTKAEWSVVGSRLEKILAIPKQE
IEKTLEEAGPNSSSLIRIARDLTEAQITAVKEYENELQDVEIHTEAIRYYPQGRELAHVL
GYTRELTPEQLKQKRQSGYRLGDVIGQMGSEKAYENLLRGEWGGQQVEVDGAGRPIRVLG
EKPAKSGTDLNLTIDLNLQIAANKALGNYNGAIVALDPKNGAVLAMVSRPTFDPNIFSKE
KLTQKDWETVQGANHPLVNRALSAFPPASTFKIVTTAAALESGKFAPNTVLQTYGSLTFG
GRRFGEWNHAGFGPLGFVGAMQWSSDTFFYQIARRVGGPTLIEWTRKFGFGQKTGFEFAS
EETRGLVPDDQWKRKTWKMPWSIGDSINMSIGQGALLTTPLQVAVMFAVPANGGYRVQPH
LLKDNEEARSWRESVNMKPTTIKILRDGLRKVITHGTGQVLNKPTLPPVAGKTGTAEAWQ
RGVKKNHAWFGAYAPADQPEIVIVAFTEHSGGGGGSLAGPMLLEILEDYFQRKHPGKYQK
PK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgactttatggcaaacatccccactgggcggagaaaaaaatacacgtacagttggacgc
aatttgcagcccgtatttttaattgcatttaccctgttgatgaccactggaataggcatt
aggttagcatacttgcaaattgtcgaaggagcgcaccaccggtcgaaagcagaggctaac
cgattgcggatcatttccaaacaaccagaaaggggtaatatttttgaccgaaatggcaaa
cttttagccagtacccgttctcctcgttctgtatatctgtggccaatggcccataccaaa
gccgagtggtcggttgtcggttcacgtctagagaaaattctggctattcccaaacaggaa
atagaaaaaacattagaagaggctggccccaactcttcttcactcattcgcattgctcgt
gacttgactgaagcccaaattactgctgtaaaagagtatgaaaacgaattacaagatgtc
gaaatccatacagaagccattcgctattacccccaaggtagagaattagcccatgtttta
ggctatacccgcgaattaactcccgaacagttaaaacagaagcgacagtcaggctatcga
ttaggagatgtcattggtcagatggggtctgaaaaggcttacgaaaaccttctccggggt
gaatggggcggtcagcaagtagaagtggatggcgcaggtcgtccgattcgggtgttggga
gaaaaaccggcaaagtccggtactgatttaaatttaaccatagatttaaatctgcaaatt
gcggcaaacaaagctttgggcaattataacggtgccattgtcgcactcgaccccaagaat
ggcgcagtcttagcgatggtgtctcgccccacctttgaccccaatatcttctctaaagaa
aaactcacccaaaaagattgggaaactgtccaaggtgcaaaccatcctttagttaatcgc
gccctgagtgcttttcctcccgccagtaccttcaaaattgtcactacggccgcggcgctg
gaatcaggtaaatttgctcccaacacagttctacaaacctacggttctttaacttttggt
ggaaggagatttggtgaatggaaccacgccggcttcggtcctttaggttttgtgggagcc
atgcagtggagtagtgatactttcttttatcaaattgctcgcagagtcggtggtcccaca
ttgattgaatggactcgtaaattcggatttggtcaaaaaactggctttgagtttgcctca
gaagaaacaagaggtttagtgccagatgaccaatggaaacgcaagacttggaagatgccc
tggagtataggcgacagcattaatatgtccattggtcaaggtgctttattaactactcct
ttgcaagttgctgtcatgtttgccgtgccagctaatggcggctaccgagttcagccccat
ttgctcaaagataatgaagaagccagaagctggcgagaatctgtgaatatgaagcccaca
accattaaaattctccgtgacggactcaggaaggtcatcactcacggtactggtcaagtt
ttgaacaagcccacacttcctcctgtagctggtaaaacaggtacggctgaagcatggcag
cgtggggtgaaaaaaaatcatgcttggtttggtgcttatgcccccgcagatcaaccagaa
attgtcatcgtcgcttttaccgaacattctggtggcggtggtggtagtcttgctggacca
atgcttttagaaattctggaagactactttcaacggaagcatcctggcaagtatcagaag
ccaaagtga
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