Nodularia sphaerocarpa: BDGGKGIB_02934
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Entry
BDGGKGIB_02934 CDS
T08134
Symbol
murD_1
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00470
D-Amino acid metabolism
nsph00550
Peptidoglycan biosynthesis
nsph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDGGKGIB_02934 (murD_1)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDGGKGIB_02934 (murD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
BDGGKGIB_02934 (murD_1)
Enzymes [BR:
nsph01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BDGGKGIB_02934 (murD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
Precursor biosynthesis
Amino acid ligase
BDGGKGIB_02934 (murD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
XdhC_C
KARI_N
TrkA_N
DAO
NodS
MurD_N
DpnD-PcfM
Motif
Other DBs
NCBI-ProteinID:
ULP73281
LinkDB
All DBs
Position
complement(3515622..3516989)
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AA seq
455 aa
AA seq
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MPRASVIGLGKSGVATARLLKREGWEVVLSDSNTSSSLLKQQQELAAEQITVKLEHSLDL
NDTDLSDLIVVSPGVPWDIPLLVKARELGIETIGEMELAWRHLQASPWVGITGTNGKTTT
TALIAAIFQAAGLNAPACGNIGYAACEVALSEKLPDWVIAEISSYQIESSVTLAPRIGIW
TTFTPDHLARHKTLENYYNIKAKLLHQSHFQVFNGDDSYLNKMGISHWPDAYWTSVKGKD
FLVSEQGFYIEDGWVVEKLKPTSKPERVLSASALRMVGEHNLQNLLMAVAAARLAGIAPD
IIDTAIRKFSGVPHRLEHICTWEGIDFINDSKATNYDAAEVGLISVNSPAILIAGGEAKP
GDDTAWLSKIQAKAAAVLLIGSAASTFAQRLQAVGYTNYEIVETMAKAVSRSAALAQEYH
ASVVLLSPACASFDQYPNFEARGDDFRNLCLAWVG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctagagcttcagtaattggattaggaaagtccggtgttgctacggccagattgttg
aaacgggaaggttgggaggtagtgctaagtgatagtaacacctcctctagcctcctgaaa
caacaacaagaactcgctgccgagcaaatcactgtaaaattggaacattccctcgattta
aatgataccgatttatctgatttaattgtcgtcagtcctggtgtaccttgggatattccc
ctgttagtcaaggcgcgagaattaggtattgaaaccatcggcgaaatggaactcgcttgg
cgacacttgcaagcttccccttgggtaggcattactggcactaatggcaaaaccaccacc
acggctttgattgccgcaatatttcaagcagccggattaaatgctcccgcctgtggtaat
attggttatgctgcctgtgaagttgctttatctgaaaaacttccagactgggtaattgca
gaaattagcagttatcaaatcgaatcttcagtgactctcgctccccgcattggcatttgg
acgacttttacaccagaccatctcgcccgtcataaaactttagaaaactactataatatt
aaagctaagttattacatcagtctcattttcaagtatttaatggtgacgactcctattta
aataagatgggtattagtcattggccggatgcttattggacaagtgttaaaggtaaagat
tttttagttagtgaacaaggcttttatattgaagatggttgggttgttgaaaagttaaaa
ccaacctctaaacccgaaagagttctctcagcctcggctttgcgaatggtaggagaacat
aatctgcaaaatctgttaatggctgttgctgcggcgcggttagcaggaattgcacctgat
attatagatactgcaattcgtaaattctctggtgttcctcatcgtttagaacatatttgc
acttgggaaggtattgattttattaatgacagcaaagccactaattatgatgcggctgaa
gttgggttaatatctgtgaatagtcccgcgattttgattgctggtggtgaagctaaaccg
ggtgatgatacggcttggttatctaaaattcaagctaaagctgcggcggttttattaatt
ggtagtgcagcatcaacatttgctcaacgtctgcaagcggtgggttatactaattatgaa
attgtggaaacgatggcgaaggctgtttctcggtcagcagcattagctcaagaatatcac
gcttctgtggtgttgttatctccggcttgtgcgagttttgatcagtatcctaattttgag
gcgcggggtgatgattttcggaatttgtgtctcgcttgggtggggtga
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