Nodularia sphaerocarpa: BDGGKGIB_03416
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Entry
BDGGKGIB_03416 CDS
T08134
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nsph
Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsph03032
]
BDGGKGIB_03416 (gyrB)
03400 DNA repair and recombination proteins [BR:
nsph03400
]
BDGGKGIB_03416 (gyrB)
Enzymes [BR:
nsph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BDGGKGIB_03416 (gyrB)
DNA replication proteins [BR:
nsph03032
]
Prokaryotic type
DNA Topoisomerases
BDGGKGIB_03416 (gyrB)
DNA repair and recombination proteins [BR:
nsph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BDGGKGIB_03416 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ULP73756
LinkDB
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Position
complement(4097754..4099691)
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AA seq
645 aa
AA seq
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MTSSYSADQIQVLEGLEAVRKRPGMYIGTTGPRGLHHLVYEVVDNSIDEALAGHCTHIEV
DINADGSVTVTDDGRGIPIDTHSRTGKSALETVLTVLHAGGKFGGGGYKVSGGLHGVGLS
VVNALSDVLEVTVWRDNKVHVQRYERGVPVTELIAKPDKEGKTGTSIKFNPDSQIFINSV
EFDYITIAGRLRELAYLNAGVKIIFGDHRLELLKSDTPRIETYEYKGGIKEYIAYMNRDK
QPLHEEIIYVHGERNNVQVEVSLQWCTDAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRT
LNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSL
VGEVLSEYLEFHPGIADSILDKAIQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSS
RDPSESEIFIVEGDSAGGSAKQGRDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLIT
ALGLGVKGDEFDSTQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRALIEQGFIYIACP
PLFKVERGKNHEYCYSERELQQYLGTLPSNANYNIQRFKGLGEMMPQQLWDTTMNPESRK
MKQVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNFTDLDI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagttacagtgccgatcagattcaagttctggaaggtctggaagccgtccgc
aaacggccagggatgtacatcggtactaccggaccgcgaggactccaccatttagtttat
gaagtggtagataactcaattgatgaagctttggcgggtcactgtacccacatagaagtg
gatatcaatgctgatggttccgtgactgtcacagatgacggtcggggtattcctatcgat
actcactcacgaactggtaaatcggctttagaaaccgtgttaaccgtactccacgctggt
ggtaagtttggtggtggtggatacaaggtttctgggggattgcacggtgtcggtctttcc
gtagttaacgccttgtcagatgtgctggaagtcacggtttggcgagataacaaagttcat
gtccagcgctatgaacgaggcgtaccagtgactgaactaatagccaagcctgataaagaa
gggaaaacgggaacttctatcaagttcaatcctgatagccaaatttttatcaatagcgtt
gagtttgattacatcacgatcgcaggtcggctgcgggagttggcttatctgaatgcaggt
gtcaaaattatctttggcgaccaccgtttagaactgctaaaaagcgatacccccagaatc
gaaacttatgaatacaagggtggtattaaagaatatatcgcttacatgaaccgcgataag
caaccactgcacgaagaaattatttatgtgcatggggaacgcaataacgtccaagtggaa
gtttctttacaatggtgtactgacgcttacacagacaacgtgctgggttttgctaataat
attcgcaccattgatggtggtactcacctcgaaggtttgaaggcggttctgactcggact
ttaaatgcgatcgcccgcaaacgcaataaaattaaagaaaatgaatctaacctcagtggt
gaacacgtccgggaaggtttaacagcagtcatttccgttaaagttccagaccctgaattt
gaaggacaaaccaaaaccaaactcggtaatacagaagttcgcggtattgttgattcctta
gtgggagaagttctcagtgaatacttagaatttcatccgggaatcgccgactcgatttta
gataaagctattcaagcatttaaagccgcagaagcagctcgtcatgcgcgggagttagtc
cgacgtaaatcagtcctagaatcttccccattacctggtaaattagcagattgcagttct
cgtgatccgagtgagtcagaaatctttattgtggaaggtgactctgcgggtggaagtgcg
aaacaaggacgcgatcgccgcacccaagccatcctccccctgcgtggtaaaattctcaat
attgagaaaacagacgacgcaaaaatctacaaaaataatgaagtccaatccttaattaca
gcccttggtttaggcgtaaaaggagacgaatttgactccacccaactgcgttatcaccgc
atcgtgattatgacagatgcggacgtagatggcgcgcatattcgcacactgttgttaact
ttcttctatcgatatcagcgcgcactgattgaacagggtttcatatatattgcttgtcct
ccactatttaaagtagaacgaggaaagaatcatgaatactgctatagcgaacgtgaattg
caacagtatttgggaacacttcccagcaacgccaactataacattcaacgcttcaaaggt
ttaggtgaaatgatgcctcaacaactctgggatactacaatgaatccagaatctcggaaa
atgaagcaagtagaaattgaagatgctgccgaagctgatcgtatttttaccattttaatg
ggcgatcgtgttgcacccagacgcgaattcattgaaacctatggttctaaactcaatttc
acagatttagacatctaa
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