Nodularia sphaerocarpa: BDGGKGIB_03508
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Entry
BDGGKGIB_03508 CDS
T08134
Symbol
apxIB_2
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph02010
ABC transporters
nsph03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BDGGKGIB_03508 (apxIB_2)
03070 Bacterial secretion system
BDGGKGIB_03508 (apxIB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsph02000
]
BDGGKGIB_03508 (apxIB_2)
02044 Secretion system [BR:
nsph02044
]
BDGGKGIB_03508 (apxIB_2)
Transporters [BR:
nsph02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BDGGKGIB_03508 (apxIB_2)
Secretion system [BR:
nsph02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BDGGKGIB_03508 (apxIB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
AAA_22
Peptidase_C70
AAA_16
Peptidase_C39_2
AAA_29
NB-ARC
nSTAND3
RsgA_GTPase
DUF3335
Guanylate_cyc_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ULP73848
LinkDB
All DBs
Position
4209071..4212160
Genome browser
AA seq
1029 aa
AA seq
DB search
MTTVFSQQHLAEKLSYTLGEKLLKQELQSCLASMELVEPPVAKQFWQSAEMNAGIYVVLA
GKVRLLDNSDDLITTLSAWSSFGEMTLFPQENFSDYTARSSQNLELGYLRQEVLQGLMDK
YPQIRSRLFSRAELWDLLLSCRQNSQFPTHPTQFQAMLKALSLFERHKLEIGSVNTQFPD
SELWLLYKGELLHSQGKSLTPAQISAEPNQGHWQAIQPTIAYILKSSHWQKALEHCQALA
SFVPESEQYPTSKTGNQISRNDSSPYKKPRPYPIAKVIPFPQREPQSKEQQKQTLPYFPS
PKVQMGHWWQRLSKRYPFYAQQSSADCGSACLVMIGKYWGKHFSVNRLRDMTNVNRSGAS
LRALATVGENLGFATRPVKATFDKFAEQSLPAIAHWEGNHYIVVYEITKKRVIVGDPAIG
QRSLTRSQFNAGWSGYALLLQPTELLKQTKNESASFWKFFELVKPHYWVLLEVFIASVLM
QIFGLVTPVFTQLLLDRVLVQRSIPTLNAVGMGMIVFGLFGIAMNAVRQYLLDHTANRVS
ISLLVGFIKHTFRLPLAYFESRYVGDIVSRIQENQKIQRFLTGETLSIMLDMLTLVIYLS
MMFWYSWRMTLFVLLTVPPFFILALASTNILRRISREIFNAGAKENSYLIESLSGIRTVR
SLAIEQTVRWRWEELLNDLVKKGFNAQVIGNRLRIISGVIQTFVNASLMWFGAWQVIQGE
MTMGQLVAFNMLVGNVLSPFQRLSMLWNGLQEIIISTERINDVLEAEPEEDLQKKPRKSL
DRLNGRICFQNVTFRYHAESETNVLENINFEIQPEQMVAVVGRSGSGKTTLSKLILGLYP
PTDGKVLIDGFDVNNIALRSLRSQIGVVDQDTFLFGGTIRENIGIAHPEATLEEITQAAR
WAGADEFIQKLPMGYESQIGESGGMLSGGQRQRLAIARALLGNPRLLLFDEATSHLDSES
ERIIQNNLKTILQGRTSVIIAHRLSTVRNADLILVLDRGVLVESGTHDELIAKQGHYYYL
NQQQLAQVV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggtattttcccagcaacatctagctgaaaaactaagttacactttgggagag
aagcttttaaaacaagaactgcaaagctgtttggcatctatggaacttgtggagccacca
gtagcaaagcagttctggcaatccgcagaaatgaacgctggtatttacgtcgttcttgca
ggtaaagttagattgttagataattctgatgatttaatcacgactctatcagcgtggtct
tcatttggtgaaatgactttgtttccacaggaaaactttagtgattacactgctagaagc
tcacaaaatttagaacttgggtatctcagacaagaggtattgcaaggattgatggacaaa
tatcctcaaatccgctcacgcctgttctctcgtgcagaactatgggatttactgctttca
tgtcgccaaaactcacaatttcccacacatccgacccaatttcaggcgatgctcaaggct
ttatccctgtttgagcgacacaaactagaaattggctctgtaaatacacaattccccgat
tctgaattatggctgttgtacaaaggtgaactgctgcattctcagggtaaatccttgaca
ccagcccaaatctctgctgaaccgaatcagggacattggcaggccatacaacccacaatt
gcttatatcctcaaaagttctcactggcaaaaagcactggaacactgccaagccttagct
tcctttgtccctgagtctgaacaatacccgacttcaaagactggaaatcagattagtaga
aacgactcttccccatacaaaaaaccacgcccataccccatagccaaggttatacccttt
ccccagagagaaccacaatcaaaagaacagcaaaagcaaacacttccttactttcctagc
ccgaaagtgcaaatggggcattggtggcaacgtttgagcaaacgctatcccttttatgct
caacaaagttccgcagattgtggctctgcttgcttggtgatgattggtaagtattggggt
aagcattttagtgtcaatcgcttgcgggatatgactaacgttaaccgcagtggtgcatct
ctacgtgccttggcaacagtgggagaaaacctcggttttgccacccgtcctgtgaaagct
acttttgataagtttgcagaacaatctttacctgcgatcgcacactgggaaggcaaccac
tacattgtcgtttatgaaatcaccaaaaagcgcgtcatcgtcggtgatcccgccatcggt
caacgtagcctcactaggagccaatttaatgcaggttggagtggttatgccttattactc
caacccacagaattactcaaacagaccaaaaatgagagtgccagtttctggaagttcttt
gagttagttaaacctcactattgggtactgctagaagtcttcatcgccagtgtcttgatg
caaatattcggactagtaacgccagtatttacccagttattactagatcgagtcctggtg
caacgcagcattcccaccttaaacgccgtgggtatggggatgatcgtttttggtttgttc
ggtatcgccatgaatgcagtgcggcaatatctgctagatcacacagccaatcgcgtcagc
atctccctacttgtgggttttattaaacataccttccgcttacccctggcttacttcgag
tcgcgttatgtgggagatattgtttctcggattcaagaaaatcaaaaaattcagcgcttc
ctcaccggcgagactttatcaatcatgctggatatgctgacattagtgatctatctgagc
atgatgttttggtatagctggcgcatgactttatttgtactattaacagtgccgccattt
tttattctcgcactagctagcacaaatattttgcgtcgcatttccagagagatttttaat
gctggagccaaagaaaacagttatctgattgaatctctgtcaggcattcgtacagtgcgt
tcattagccattgaacagacagtacgctggcgttgggaagaattgctgaatgatttagtc
aaaaaaggttttaatgcccaagtgattggtaatcgcctgcgaatcattagtggcgttatt
caaacctttgtcaatgcttccttaatgtggtttggcgcatggcaagtcattcaaggggaa
atgacaatggggcagttagtagcttttaatatgttggtgggtaacgtcttgagtcctttt
caaagactatcaatgctgtggaatggtttgcaggaaattattatttctaccgaacgaatt
aatgatgttttagaagcagaaccagaagaagacttgcaaaagaaaccccgcaagtctcta
gatagactaaatggccggatttgctttcaaaatgtcacctttcgttatcatgcagaaagt
gaaactaacgtgctggaaaatatcaactttgaaatccagccagagcaaatggttgcagtt
gtggggcgcagtggttcgggaaaaaccaccttgagtaaattaattttaggtttataccca
ccaacagatggcaaagttctgattgacggctttgatgttaataatattgcattgcgatcg
ctgcgttctcaaataggtgtagttgatcaagatacctttctgtttggtggcacaattcga
gaaaacattggcatcgctcacccagaagctaccttagaagaaattacacaagccgcacga
tgggcaggtgcagatgaatttattcagaaattgccaatgggttatgaatcccaaattggt
gaaagtggcggaatgctttctggtggacaacgccaacgcctagccattgccagagcctta
ctcggcaacccccgcttattactctttgatgaagccactagtcacctagactcggaatca
gaaagaattattcagaacaacctcaaaacaattctccaagggcgtaccagcgtcattatt
gcccatcgcctttccacagtccgcaatgctgatctaattttagttttagatcgaggcgta
ttagtcgaaagcggtactcatgacgaattaattgctaaacagggacattactactatctc
aatcaacaacaattagctcaagtcgtttaa
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