KEGG   Nodularia sphaerocarpa: BDGGKGIB_03786
Entry
BDGGKGIB_03786    CDS       T08134                                 
Symbol
cshC
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshC
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nsph  Nodularia sphaerocarpa
Brite
KEGG Orthology (KO) [BR:nsph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsph03400]
    BDGGKGIB_03786 (cshC)
Enzymes [BR:nsph01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BDGGKGIB_03786 (cshC)
    5.6.2.6  RNA 3'-5' helicase
     BDGGKGIB_03786 (cshC)
DNA repair and recombination proteins [BR:nsph03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BDGGKGIB_03786 (cshC)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WH_Lhr Cas3-like_C_2
Other DBs
NCBI-ProteinID: ULP74124
LinkDB
Position
complement(4522214..4524376)
AA seq 720 aa
MTFSRLAPFIQEYIYHHNWTELRPVQLAASEVIFNTDAHLLIAAATASGKTEAAFLPVLT
LLHEKPAKSIGVLYIGPIKALINDQFERLNDLLKTADIPVWHWHGDVAQSRKNKLIKNPQ
GVLQITPESLESLLINKNNDLMRLFGDLRFVIIDEIHSFMGSERGCQIICQLQRLANLTK
TQPRRIGLSATLGNYAMAEEWLRSGSDKPVITPNITAEKRQIKLTVEHFYLNNEIDESEA
TTYEKYIFNLSKSRKCLIFANNRTQTESVIASLRRIATEQALPDIYHVHHGSISASLRQA
AENAMREPQNPAVTAATLTLELGIDIGHLERVIQLESPLSVASFLQRLGRSGRRGEPADM
RLICGENQPLAEAPLPEQIPWQLLQCIAIIQLYLEERWIEPIQPIKYPLSLLYHQTMSIL
AATGEMTPAALAKQILNLSPFAAISSAEFKLLLQYLIDIDHIQQTETGKLIIGLAGEKIV
GKFQFYAVFADSQEYAVKQGTTEIGSISIPTPVGNQFALAGRTWEVLEVDFKKKVILVKQ
VAGKATIYWRGGSGSIHTRVLQRMRQVLLEDVEYSYLQNNAQERLNLVRQVTRNAGLDKG
NILQLEKGKCCIFPWMGTVAYRTLERLLNSLCRESLEINSIGGVNPYYLTIKLGKDKFKY
LQTELVSLCEQRISAEDLVSSAEAPELQKYDQFIPHSLLRKAFIGDYLDILQVKQQILLW
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaccttttcaagacttgcaccctttatccaagaatacatctaccatcacaattggact
gaattacgaccagtacaattagcagcttctgaagttatatttaacaccgatgctcatttg
ctaattgcggctgcaacagcgtcgggaaaaacagaagcagcatttttaccagtattgact
ctattacatgaaaaacccgctaaaagtatcggtgtattatatattggtccgatcaaagct
ttaattaatgaccaatttgaacgcctcaacgacttgctgaaaacagcagatattccagta
tggcattggcatggtgatgtcgcacaaagtcgcaaaaataaactgattaagaatccccaa
ggcgttctgcaaattacgccagaatctttagaaagtttgttaattaacaagaataatgat
ttgatgcgcttatttggtgatttacgatttgtgatcattgacgaaatccattcttttatg
ggttctgaacgtggttgtcaaattatttgccaattacagcgtttagccaacttgacaaaa
acccaaccccgccgcattggtttatcagcaaccctgggtaattatgcaatggctgaagag
tggttacgttctggaagtgacaagcctgtaattaccccgaatatcacagccgaaaaacgc
caaattaagctgactgtagaacatttttatctgaataatgaaatcgatgaatcagaagcc
acaacttacgagaaatatatttttaacctcagcaaatctcgtaaatgtctgatttttgcg
aataatcgcacccaaactgaatcagtaattgcatctttacgccgaattgctacagaacaa
gcattaccagacatctatcacgtacatcatggcagtatttctgctagcttacgccaagct
gcggaaaatgccatgcgcgaaccccaaaatccggctgtaactgctgctactctaacttta
gaattaggcatagatattggtcatttagagcgagttattcagttagaatcgcctttgtct
gttgctagttttttacaacgtttaggacgcagtgggagaagaggtgaacctgctgatatg
cgcttgatttgtggtgaaaatcaaccattagctgaagcacctttaccagaacaaattcct
tggcaacttttacaatgtattgccattattcaactttatctagaagaacgttggattgaa
ccaatacaaccgattaaatatcctttgagtttgctatatcatcagacaatgagtatttta
gcagcaacaggagaaatgacacctgcggctttagctaaacaaattttaaatttatcaccc
tttgcagctatttcctcggcagaatttaagctattattacaatatttaattgatatagac
cacattcagcaaacagaaacaggtaaattaatcattggtttggctggagaaaagatagtc
ggaaaatttcagttttatgctgtgtttgctgatagtcaagaatatgcagttaagcaaggt
acaacggaaattggcagtatttccataccaacccctgtgggtaatcaattcgccttagca
ggtagaacttgggaagttttagaagttgacttcaaaaaaaaggtaattttggtgaagcaa
gtagcaggtaaagctactatttattggcggggtggtagtggtagtattcacaccagagtt
ttgcaaaggatgcggcaagtattactagaagatgtagaatatagttacttgcaaaacaat
gctcaagaacgtttaaatttagttcggcaagtgacccgaaatgctggattagataaagga
aatattttacaattagaaaaaggtaaatgctgcatctttccttggatgggtacagtggct
taccggactttggaaagattgcttaattctctttgtcgagaatcgttagaaattaatagt
attggtggggtgaatccttattatttgacaatcaaattaggtaaagataaatttaaatat
ctgcaaacagaacttgtttcactgtgtgaacaaagaattagcgcagaagatttagtcagt
tccgcagaagccccagaactgcaaaaatatgatcaatttattcctcattccctgttaaga
aaagcgtttatcggggattacttagatattctacaagttaagcagcaaattttactttgg
tag

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