Nodularia sphaerocarpa: BDGGKGIB_04393
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Entry
BDGGKGIB_04393 CDS
T08134
Symbol
udg
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BDGGKGIB_04393 (udg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsph03400
]
BDGGKGIB_04393 (udg)
Enzymes [BR:
nsph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BDGGKGIB_04393 (udg)
DNA repair and recombination proteins [BR:
nsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BDGGKGIB_04393 (udg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ULP74723
LinkDB
All DBs
Position
complement(5223723..5224403)
Genome browser
AA seq
226 aa
AA seq
DB search
MSSDIQLTLFDDSNSNPRDLIPTNAKIPITPGTYNNITELAQDCNQCHRCGLGDNRTHAV
VGRGNLQAPIMLIGEAPGQKEDETGLPFVGRSGQLLEKILASVNLSTEQDIYIANINKCR
PPANRPPAPDEIAACIPYLLEQIRLVDPKIILLTGATAVKGITGDKRGITKIRGQWLEWE
GRLCMAIFHPSYLLRNPSKEVGKPKWLMWQDIQAVRAKLDEIRKNS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgacattcaacttacacttttcgatgactccaactcgaacccacgagattta
attcccacaaacgcaaaaattcccatcacaccaggaacatacaacaatatcaccgagttg
gcacaggattgtaatcagtgccaccgttgtggcttgggagacaatcgaactcatgctgtt
gttggtcgtggtaatctccaagcaccaatcatgctcataggagaagcaccaggtcaaaaa
gaagatgaaaccggtttaccatttgtaggtaggtcaggacagttgctagagaaaatatta
gcatctgtgaatctgagtaccgaacaagatatatatattgccaatatcaataaatgtcgt
ccaccagcaaaccgaccccccgcccctgatgaaatagcggcttgcataccctatttacta
gaacaaattcgccttgttgacccgaaaataattttactcacaggtgcaactgcggttaaa
ggtattactggcgataagcgggggattacgaaaattcgcggacagtggttggagtgggaa
gggcgtttatgtatggcgatttttcacccctcttacctgttacgtaatccttctaaggaa
gtaggtaagcccaaatggttaatgtggcaagatatccaagcagtgcgtgccaaattggat
gaaatcaggaaaaatagttga
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