Nodularia sphaerocarpa: BDGGKGIB_04474
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Entry
BDGGKGIB_04474 CDS
T08134
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00300
Lysine biosynthesis
nsph00470
D-Amino acid metabolism
nsph01100
Metabolic pathways
nsph01110
Biosynthesis of secondary metabolites
nsph01120
Microbial metabolism in diverse environments
nsph01230
Biosynthesis of amino acids
Module
nsph_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BDGGKGIB_04474 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDGGKGIB_04474 (dapF)
Enzymes [BR:
nsph01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BDGGKGIB_04474 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ULP74803
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All DBs
Position
complement(5325628..5326467)
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AA seq
279 aa
AA seq
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MAIEFTKYHGLGNDFILVDNRASSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGADY
TMRIFNSDGSEPEMCGNGIRCLGRFIADLEGESRNKDSYRIHTLAGMITPQLMADGQVKV
DMGLPRLLAGEIPTTLGTAETKVINQPIEVAGQTWEVTCVSMGNPHCITFVEDVAAIPLE
IIGPQFEHHPAFPQRINTEFIQVVSRDYVKMRVWERGAGITLACGTGACASLVAGVLTGK
CDRIATVELPGGPLQIEWSEIDQRIYMTGPAQLVFTGQL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgaatttactaagtatcacggactgggaaacgattttattttagttgacaac
cgcgcgtcatccttgccagtattgactccagagcaagcaattcaattgtgcgatcgccac
tttggtatcggtgctgatggtgtgatttttgccttaccgggagaaaacggtgctgattac
accatgcggatttttaattccgatggttcagaaccggaaatgtgtggtaatggtattcgc
tgtttaggaagatttatagccgatttagaaggcgaatcccgaaacaaagactcatatcgc
attcataccctagctgggatgattacacctcaactgatggctgatggtcaagttaaggta
gatatgggtttaccaagattactagctggggaaattcccaccaccctgggtactgctgag
acaaaagtaattaatcaacccatagaagtagcgggtcaaacttgggaagtcacctgtgtc
agtatgggaaatcctcactgtattacctttgtcgaagatgttgcggctattcccttagaa
attatcggaccccaatttgaacatcacccagcctttccccaacgcataaatactgaattt
attcaagtagtcagtcgagactatgtaaaaatgcgggtatgggaacgaggagcaggtata
acattagcctgtgggacaggtgcttgtgcttccttagtggctggggtattgactggaaaa
tgcgatcgcatcgccaccgtagaattaccaggtggacccttgcaaattgaatggtcagaa
atcgaccaacgaatttacatgacaggtccagcccaactagtattcacaggacaactgtaa
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