Nodularia sphaerocarpa: BDGGKGIB_04517
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Entry
BDGGKGIB_04517 CDS
T08134
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph03030
DNA replication
nsph03430
Mismatch repair
nsph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BDGGKGIB_04517 (dnaX_2)
03430 Mismatch repair
BDGGKGIB_04517 (dnaX_2)
03440 Homologous recombination
BDGGKGIB_04517 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsph03032
]
BDGGKGIB_04517 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
nsph03400
]
BDGGKGIB_04517 (dnaX_2)
Enzymes [BR:
nsph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BDGGKGIB_04517 (dnaX_2)
DNA replication proteins [BR:
nsph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BDGGKGIB_04517 (dnaX_2)
DNA repair and recombination proteins [BR:
nsph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BDGGKGIB_04517 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
Intein_splicing
AAA
PT-HINT
RuvB_N
AAA_16
AAA_22
TIP49
AAA_18
AAA_11
T2SSE
DNA_pol3_delta_C
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ULP74846
LinkDB
All DBs
Position
complement(5375266..5378583)
Genome browser
AA seq
1105 aa
AA seq
DB search
MSYEPLHHKYRPKSFAELVGQEAIATTLTNAIRTAKIAPAYLFTGPRGTGKTSSARILAK
SLNCLNSDQPTAEPCGVCDVCQGITKGYSLDVIEIDAASNTGVDNIRELIEKAQFAPVQC
RYKVYVVDECLTGDSLVLTDQGLVRIDDPSINGKKVMSYNDSSGEWQFKQVVRWLDQGER
QTLVIKTNNREIRCTGNHLIRTDQGWIPAKDVKEGVKILSPVNVGAVSSFINLVSMDASG
DSLADTNLKAIHPGKNLTTWNLFFNKLNYLDLSVLAGVAKSLISPHFYKKKVGELAASSL
TGKDIHTKKDTEIGNSEQKSSLPMLRFYNQMPLDLSMEPYWETAPSLTLINTADSPDCAG
HTQKSSKNGWNTKPSAFKNYVHNCELQLTKGTETPQLPATPFVIPNSKVSLKLSNQMGIK
NLSLWTGSIELPQRDWLGGFAMMDHSALLHKAVHRFNCILKDSLSQKINSLLLGLPQWDT
QPPVSLTPEVVQDRNTTISGWGQEPVDSGWQTSNNIQSPQWITSLETVESVHLAGVERVY
DIEVADNHNFVANGLLVHNCHMLSTAAFNALLKTLEEPPKHVVFVLATTDPQRVLPTIIS
RCQRFDFRRIQLEAMVQHLSAIASKESINIAPGAVTLIGQIAQGGLRDAESLLDQLALTV
GEVTPDKVWDLVGSVSEQDLIALLKAIAQNHPEAVLDCSRKILDSGREPLIILQNLAALY
RDLLIAQTASNRQDLVTCTQQTWIALVELSQKFDMSTILRGQQHLRTSEVQIKNTTQPRL
WLEVTLLGLLPSANVQTQAVNTSPRVNAPAVAPNYYPVASSPPQPINQNPTVNPVVSSPP
QPINQNPTVNPVASSPPQPINQNPTVHSEPITPSPQTQAPAPANSEPASPQEVITQSEYD
LTQVWQQVRVNIQMPSRQALLGQMCQITEFNGNVARIAVKGAWLDTLKSDLPVIKAAFQQ
IFQREIQVYLEKATSSTPNSSRTNPPPQNFTPVQQPPAPNYNQQIQSLAPAAPATPTPAP
APAPAPVITPAKTESTTGAGRVQTLPPRPTPTPPAEWETDEVAIAAKRLADFFNGQVIRF
TDDGIDSPESMATPEGLDEPEIDDD
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgaacccctccaccataagtatcgcccaaagagttttgctgaactggtggga
caagaggcgatcgctactaccctcaccaacgcgattcgcactgctaaaattgcccctgcc
tatttattcacaggccccagagggacgggaaagacttctagcgcccggattctcgctaaa
tctttaaattgtctcaacagtgaccaacccactgctgaaccctgtggagtatgtgatgtt
tgtcaaggcattactaagggctactctctcgatgtgatagaaattgatgctgctagtaac
actggtgtagataatatccgcgagttgattgaaaaggcgcagtttgcccctgtgcagtgt
cgctacaaggtttatgtggtcgatgaatgtctgactggagattctctggttttaactgat
caaggactcgtcagaattgatgatcctagtatcaacggcaagaaggtgatgagttacaac
gattcatcaggcgagtggcaattcaagcaagttgtcaggtggttagaccaaggagaacgt
caaacgctggtcatcaagacgaataaccgagaaattagatgtacgggtaatcatttaatc
aggacagatcagggatggataccagcaaaagacgtaaaagaaggagtgaagatactatct
cctgtgaatgtgggtgcggtatcctcatttataaatttggtgtcgatggacgcatccggc
gattcgttagcggacaccaatttaaaggcaatacatccgggcaaaaatcttacaacctgg
aatctattcttcaacaagctgaattatttagacctttctgtgcttgcgggtgtggcgaaa
agcttaatatccccacatttttacaaaaaaaaggtaggggaattggcagcatccagtctc
actggaaaagacatccatacaaaaaaggacacggaaattgggaactcagaacagaaaagt
tccttgccaatgctgcggttttacaaccagatgcccttggacttatctatggaaccttac
tgggagacggctccatctcttaccctaataaatacagccgattccccagattgtgctgga
cacacgcagaaaagcagcaagaatggttggaatacaaagccaagcgccttcaagaattac
gtccacaactgcgaattgcaattaacaaagggtacggaaacacctcagttacctgcaaca
ccgtttgtcatccccaactcaaaggtgtctttgaaattgtcaaaccaaatggggataaaa
aacttgtctctatggactggctcaatcgaattaccccagagggactggcttggtggtttt
gcgatgatggatcactcagccttactccacaaggcagtccacagattcaattgcatactg
aaggattctctgtcacagaaaatcaactcattgctacttggcttacctcaatgggatacc
cagccgccagtaagtcttacaccagaagtagtacaggacagaaatactactatatctgga
tgggggcaagaaccagtagacagtggttggcagacctcaaacaatattcaatcccctcaa
tggattacaagtttggagacagtcgaatctgttcacctcgctggagttgaacgagtctat
gacattgaagtggcagataatcacaactttgtggcaaatgggcttttggtgcataattgc
catatgctcagtacggcggcattcaatgcgttattaaaaacattagaagaaccaccgaaa
cacgtagtttttgttttagccacaacagacccgcagcgagtcttgccaacgattatttca
cgctgtcaaagatttgattttagaaggattcagttggaggcgatggttcagcatttaagt
gcgatcgcctctaaagaaagtattaatatagctcctggtgctgtcaccttaatcggtcaa
attgctcagggaggattgcgagatgcagaaagtctactggatcaattagctttgactgtg
ggtgaagtcacacctgacaaagtttgggatttggtgggttcagtgagtgaacaagactta
attgctttattgaaggcgatcgctcaaaatcatccagaagcagttttagattgtagccgt
aaaatcctcgatagtggacgagaaccgctaattattctgcaaaatctcgccgccttatac
cgagatttactcatagcacaaacagcatctaatcgccaggatttagttacttgtacccag
caaacctggatagcgttagtagaattgtcccaaaaattcgacatgagtacaattttgcgg
ggacagcaacacctacgcacatctgaagtgcagattaaaaataccacccaaccccgtttg
tggttagaagtgacattactgggattattgccaagtgcaaatgttcaaacccaagctgta
aatacatctccgcgagtaaatgcgcctgctgtagctccaaattattacccagtcgcttct
tcaccacctcagcccataaatcaaaatcccaccgttaacccagtcgtttcttcaccacct
cagcccataaatcaaaatcccaccgttaacccagtcgcttcttcaccacctcagcccata
aatcaaaatcccaccgttcattccgaaccaatcacaccgtcacctcaaactcaagcacca
gcacctgcaaatagtgaacctgcatctccacaggaagttattacacaatcagagtatgac
ttaactcaagtttggcaacaggtgcgtgtgaatattcagatgccttctcggcaagcttta
ctcggtcaaatgtgccagattacagagtttaacgggaacgtagctcgtattgctgtcaaa
ggcgcttggttagacacacttaaatctgatctgccggtgattaaggctgctttccaacag
attttccagcgcgaaatccaggtttatctggaaaaagcaacttcttctactcctaactcc
agcagaacaaatcctccaccacaaaattttactcccgttcagcaaccaccagcacccaac
tacaatcagcaaattcaatctttagcaccggcggctccagctacaccaacaccagcacca
gcaccagcaccagcaccagtaataacaccagcaaaaaccgaatcaacgacgggtgcaggt
agggtgcaaaccttacccccacgaccaacgccaacacccccagctgaatgggaaactgat
gaagtggcgatcgccgccaagcgtctagcggatttcttcaatggtcaggttatccgcttt
acagacgatggaatagattcgcctgaatctatggctacacctgagggcttggatgaacca
gaaattgatgatgattga
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