Nocardia sputorum: IFM12276_03710
Help
Entry
IFM12276_03710 CDS
T09151
Name
(GenBank) putative DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nspu
Nocardia sputorum
Pathway
nspu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IFM12276_03710
09124 Replication and repair
03420 Nucleotide excision repair
IFM12276_03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nspu03021
]
IFM12276_03710
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_03710
Enzymes [BR:
nspu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFM12276_03710
Transcription machinery [BR:
nspu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IFM12276_03710
DNA repair and recombination proteins [BR:
nspu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IFM12276_03710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDT97342
LinkDB
All DBs
Position
375689..377347
Genome browser
AA seq
552 aa
AA seq
DB search
MNDGPLIVQSDKTLLLEVDHELADSARQAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDVVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVL
RHKKIAPMLGARIDDDTVVVHPSERGRIKQMLLKIGWPAEDLAGYVDGEAHPIELDYATD
GWHLRDYQQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWR
RELLARTSLTEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCIEVRVTLTDAERMAYATAEPEARYKLCSTAHTKIAVVESILAQHQDAPSLVIGAY
LDQLDELGAALDAPVIQGSTKTKEREELFDAFRRGEIPVLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPAIG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacggtccgctgatcgtgcagagcgacaagacgctgctgttggaggtcgaccac
gagctggccgattcggcgcggcaggcgatcgcgccgttcgccgagttggagcgggcgccg
gagcacgtgcacacctatcgggtgacgccgctggcgctgtggaacgcgcgcgcggcgggt
cacgacgccgagcaggtggtggacgcgctggtcagcttctcccggtacgcggtgccgcag
ccgttgctggtcgacgtggtggacaccatggcccgttacggcaggttgcagctggtgaag
catcccgcgcacgggttgacgctggtcagcctcgatcgcgcggtgctggaggaggtgctc
cggcacaagaagatcgcgcccatgctcggcgcgcgcatcgatgacgacacggtggtggtg
cacccgtccgagcgcggccggatcaagcagatgctgctgaagatcggctggcccgccgag
gacctcgcgggctacgtcgacggcgaggcgcacccgatcgaactcgactacgcgaccgat
ggctggcacctgcgcgactaccagcagatggccgccgactcgttctgggcgggcggctcc
ggcgtggtggtgctgccctgcggcgcgggcaagacgatggtcggcgctgcggcgatggcc
aaggccaaggcgaccacgctgatcctggtcaccaacacggtggcgggcaggcagtggcgg
cgcgaactgctcgcgcgcacctcgctcaccgaggacgagatcggcgagtactccggcgag
cgcaaggagatccgcccggtcaccatcgccacctaccaggtgatcacgcgtcgcaccaaa
ggtgagtacaagcacctggaactgttcgacagccgcgactggggcctggtcatctacgac
gaggtgcacctgctgcccgccccggtcttccggatgaccgccgatctccagtcccgtcgg
cggctgggcctgaccgcgacgctggtgcgtgaggacgggcgcgagggcgacgtgttctcg
ctgatcggcccgaagcgctacgacgcgccgtggaaggacatcgaggcccaggggtggatc
gcgcccgccgactgcatcgaggtccgggtcaccctgaccgatgccgagcggatggcctac
gcgaccgccgagccggaggcgcggtacaagctgtgctccaccgcgcacaccaagatcgcc
gtggtcgaatcgatcctggctcagcatcaggacgcgccgagcctggtcatcggggcctac
ctggatcagctggacgaactcggcgccgctctcgacgcccccgtgatccagggctcgacg
aagaccaaggagcgcgaggaactgttcgacgcgttccggcgcggcgagattccggtgctc
gtggtgagcaaggtggcgaacttctccatcgatttgccggaagcgtcggtggccgtgcag
gtttcgggtaccttcggctcgcggcaggaggaggcgcagcgtctcggccggctgctgcgt
ccgaaacacgacggcggccaggcgcatttctactcggtcgtcgcgcgggacaccctcgac
gccgaatacgccgcgcatcgtcagcgttttctcgccgaacaggggtatgcctaccgcatc
acggatgccgacgacttgctcggccccgccatcggataa
DBGET
integrated database retrieval system
