Nocardia sputorum: IFM12276_07050
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Entry
IFM12276_07050 CDS
T09151
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nspu
Nocardia sputorum
Pathway
nspu00260
Glycine, serine and threonine metabolism
nspu00460
Cyanoamino acid metabolism
nspu00630
Glyoxylate and dicarboxylate metabolism
nspu00670
One carbon pool by folate
nspu00680
Methane metabolism
nspu01100
Metabolic pathways
nspu01110
Biosynthesis of secondary metabolites
nspu01120
Microbial metabolism in diverse environments
nspu01200
Carbon metabolism
nspu01230
Biosynthesis of amino acids
nspu01240
Biosynthesis of cofactors
nspu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IFM12276_07050 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IFM12276_07050 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IFM12276_07050 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IFM12276_07050 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IFM12276_07050 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IFM12276_07050 (glyA)
Enzymes [BR:
nspu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IFM12276_07050 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
BDT97676
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Position
810274..811569
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AA seq
431 aa
AA seq
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MTQTTASVNSQSLGELDPELAAAMAGELARERDTLEMIASENFVPRAVLQAQGSVLTNKY
AEGYPGRRYYGGCEHVDVVETLARDRAKELFGAEFANVQPHSGAQANAAVLMSLMDPGDK
LLGLDLAHGGHLTHGMRLNFSGKLYEVHSYGVSKEDHRVDMDEVRDIALRARPKVIVAGW
SAYPRHQDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGGP
RSGLILAKQEYAKKLNSSVFPGQQGGPLMHAIAAKAVAFKIAASEEFRNRQERTLSGAKI
LAERLTAADVKDKGISVLTGGTDVHLVLVDLRNSELDGQQGEDLLHEIGITVNRNAVPFD
PRPPMVTSGLRIGTAALATRGFGDTEFAEVADIIAGALAGGADLDALRARVSKLAKDVPL
YDGLEDWRLLG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagacgaccgcctctgtcaattcccagtctctcggtgagctcgatccggagctc
gctgccgcgatggcaggcgagctcgcccgcgaacgcgacacgctcgagatgatcgcctcg
gagaacttcgtgccgcgcgcggtgctgcaggcgcagggcagcgtgctgaccaacaagtac
gccgagggctacccggggcggcgctactacggcggctgcgagcacgtcgacgtggtggag
acgctggcgcgcgaccgcgccaaggagctgttcggcgccgaattcgccaacgtgcagccg
cattccggcgcgcaggccaacgccgcggtgctgatgtcgctgatggacccgggcgacaag
ctgctcggtctcgacctcgcgcacggcggtcacctgacccacggcatgcgcctgaacttc
tccggcaagctctacgaagtgcactcctacggggtgagcaaggaagaccaccgcgtcgac
atggacgaggtgcgtgacatcgccctgcgggcgcgcccgaaggtgatcgtggcgggctgg
tcggcctacccgcgccaccaggacttcgcggcgttccgctcgatcgccgacgaggtcggc
gcctacctgtgggtggacatggcccacttcgccggtctggtcgccgccggtctgcacccc
tcgccggtgccctacgccgacgtggtgtcctcgaccgtgcacaagaccctcggcggtccg
cgctccggcctcatcctggccaagcaggagtacgcgaagaagctgaacagctcggtgttc
ccgggccagcagggcggcccgctcatgcacgccatcgccgccaaggccgtcgcgttcaag
atcgccgcgagcgaggagttccgcaaccggcaggagcgcaccctgtccggcgcgaagatc
ctggccgagcggctcaccgccgccgacgtcaaagacaagggcatcagcgtgctcaccggc
ggcaccgacgtgcatttggtgctggtcgacctgcgcaactccgaactcgacggccagcag
ggcgaggacttgctgcacgagatcggtatcaccgtgaaccgcaatgccgttccgttcgac
ccgcgtcccccgatggtcacctccggcctgcgcatcggcaccgccgccctggccacccgc
ggcttcggcgacaccgagttcgccgaggtcgccgacatcatcgcgggcgcgctggccggt
ggcgccgacctggacgcgctgcgggcccgggtgagcaagctggccaaggacgtcccgctg
tacgacggcctggaggactggcgcctgctgggctga
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