Nocardia sputorum: IFM12276_14660
Help
Entry
IFM12276_14660 CDS
T09151
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nspu
Nocardia sputorum
Pathway
nspu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IFM12276_14660 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_14660 (fpg)
Enzymes [BR:
nspu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IFM12276_14660 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IFM12276_14660 (fpg)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IFM12276_14660 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BDT98437
LinkDB
All DBs
Position
1614984..1615844
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLAEHAVGRVVESVAITHPRSVRRHLEGAADLAARLTGLEVESAERRG
KFLWLTFDDPEAALVVHLGMSGQMLVQPMDAPLEKHAHIRATFGDGTQLRFVDQRTFGGW
ALAPLVEVDGTLVPQPVAHIARDPLDPRFDVESVVAAIRGKQSEIKRVLLDQGVVSGIGN
IYADEALWRAKIHGGRLASGLSRPAVRGLLAEVGAVMGEALAAGGTSFDALYVNVNGQSG
YFERSLAVYGREHEPCRRCGAPIIRERFMNRSSYSCPRCQPKPRRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactacccgaggtcgaggtcgtgcgacgcgggctcgccgaacatgcggtgggc
cgggtcgtcgaatcggtggcgatcacccatccccgctcggtgcgccgccatctcgaaggc
gccgccgatctcgccgcccggctgaccggcctcgaggtcgagtcggccgagcggcgcggc
aaattcctctggctgaccttcgacgacccggaagcggccctggtcgtgcatctcggcatg
agcggtcagatgctggtccagcccatggacgcgccgttggagaagcacgcgcatatccgc
gccaccttcggcgacggcacccagctgcgcttcgtcgaccagcgcactttcggcggctgg
gcgctcgccccgctggtcgaggtggacggtaccctggtgccgcagcccgtcgcgcacatc
gcccgcgacccgctggacccgcgtttcgacgtcgagtccgtggtcgccgccatccggggc
aaacagagtgagatcaaacgcgtcctgctcgatcaaggcgtcgtctccgggatcggcaac
atctacgccgacgaggcgctgtggcgtgcgaagatccacggcggccggctcgcctcgggg
ctgtcgcggcccgcggtgcgcgggttgctggccgaagtcggcgcggtgatgggcgaagcg
ctcgcggcgggcggtacctcgttcgacgcgctctatgtgaacgtcaacggccagtcgggc
tacttcgaacgctcgctcgccgtatacggtcgggagcacgaaccgtgtcgccggtgtggt
gcgccgatcattcgggagcggttcatgaaccgctcgtcctactcctgcccgcgctgccag
ccgaagcctcgtcgtcggtag
DBGET
integrated database retrieval system
