Nocardia sputorum: IFM12276_14880
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Entry
IFM12276_14880 CDS
T09151
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nspu03036
]
IFM12276_14880 (smc)
Chromosome and associated proteins [BR:
nspu03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IFM12276_14880 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
PDC10_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDT98459
LinkDB
All DBs
Position
1640080..1643691
Genome browser
AA seq
1203 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRLEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK
MQDVIFAGTAGRAPLGRAEVTLTIDNSDGALPIDYAEVSITRRMFRDGAGEYEINGNSCR
LMDVQELLSDSGIGREMHVIVGQGQLSAILESRPEDRRAFVEEAAGVLKHRKRKEKAVRK
LEAMQANLARLTDLTTELRRQLKPLGRQAEVARRAQTVQADLRDARLRLAADDLVTRRAE
LASQQSKEAYAREQQITVQTELDAANAALAQQEFQLSRLTPSAEAAAQIWFQLSALAERV
NATIRIAGDRARHLDAAAPVSTGRDPEQLEAEADRVEAEEAELREAVEMAAETLEAARDQ
LAEREHAAKAAEQAHLAAVRAIADRREGVARLSGKVDTLRARAQSVDAEIARLSVAIADA
RHRGEAAQTEFDTVQDELAELDAGEAGLDAQHEHAVQALELADQRVTELREQDREASKRV
ASLSARIEALGMNLARRDGVAWLVEHREQGLLGPLSGLLRVHAGFEAAVAAALGPLADAV
AADTGESAHAAIEALKDADGGRAAVVFGTDSGEPPKPGALPGGARWLVDVVECPDPVRGA
IAALTSGTAVADDLPSARALVAARPELRVVTRDGDLAGNGWLLGGSDRAPSQLEIQADID
AARAELVAAQRRAEELEAALSGALEEQSDRKDAVDQALLALHESDQALVAIYERLGRLGQ
TARTAHAESERLLGQRDDAEAGREEALASLAELEDRLRHAELEQSEVDADGAGAAGTESA
GRAREEAAAALAEARAMEVEARLAVRTAEERAESVRGKADSLRRAARAERENRARAERAQ
AARKKAAEVAAAVAESGAKIAAELERVVGEAGARRDELVRRRSECAAQVEQVKERVRALT
AQLSQLTDAVHRDEVAKAQAALRIEQLEATIAEQFGIALDDLIAEYGPDVPLPPSALEMQ
EYEQAKERGEQVSEPAPMPYDRQTQERRAKRAEKDLATLGKVNPLALEEFAALEERYNFL
ATQLEDVKSARKDLLDVVAEVDARILQVFTEAYADVEREFVEVFAKLFPGGEGRLLLTDP
SDMLTTGIEVEARPPGKKVKRLSLLSGGEKSLTAVALLVAIFRARPSPFYVMDEVEAALD
DTNLRRLIGLFEQLREKSQLIVITHQKPTMEIADALYGVSMRGDGITQVISQRLRGENLA
PVG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgcacctgaagagcctgacgttgaagggcttcaaatccttcgcgtccgcgacgacgttg
cggttggagcccggcatcacgtgtgtggtcggtccgaacggatcgggcaaatcgaacgtc
gtcgacgcgctcacctgggtgatgggcgagcagggcgcgaaggcgctgcgcggcggcaag
atgcaggacgtgatcttcgcgggcaccgccggacgcgcaccgctcggccgcgccgaggtc
acgctgaccatcgacaattccgacggcgcgctgccgatcgactacgccgaggtgtccatc
acccggcgcatgttccgcgacggcgcgggcgaatacgagatcaacggcaactcctgccgc
ttgatggacgtgcaggagctgctcagcgactcgggcatcggccgggagatgcacgtcatc
gtcgggcagggtcagctgtcggccatcctcgagtcgcgcccggaggaccggcgcgcgttc
gtcgaggaggccgccggtgtgctcaagcaccgcaaacgcaaggagaaggcggtccgcaag
ctggaggccatgcaggccaacctggcccggctgaccgacctcaccaccgaattgcgccgc
cagctcaaaccgctcggcaggcaggccgaagtggcccgcagggcgcagaccgtgcaggcc
gatctgcgcgacgcccggctgcgcctggcggccgacgacctggtcacccgccgcgcggaa
ctcgcgagccagcagagcaaggaggcgtacgcgcgcgagcagcagatcaccgtgcagacc
gagctggacgcggccaacgcggcgctggcgcagcaggaattccagctgtcgcggctgacg
ccgagcgccgaggccgccgcccagatctggttccagctctcggcgctggccgagcgggtc
aacgcgaccatccggatcgcgggcgaccgggcgcggcacctggacgctgccgctccggtc
agcaccggccgcgatcccgagcagctcgaggccgaggccgaccgcgtcgaagccgaggaa
gccgagctgcgcgaggcggtcgagatggccgccgagaccctggaagcggccagggaccag
ctggccgaacgtgaacacgccgccaaggccgccgagcaggcgcatctggccgccgtgcgg
gcgatcgccgaccggcgcgagggcgtggcccggttgtccggcaaggtcgacacgctgcgg
gccagggcgcagtcggtggacgcggagatcgcgcgcctgtcggtcgccatcgccgacgcc
cgccaccgcggcgaggcggcgcagaccgaattcgacacggtgcaggacgaactggccgaa
ctcgacgcgggcgaggcggggctcgacgcccagcacgagcacgccgtgcaggccctcgaa
ctggccgatcagcgcgtcaccgaactgcgtgagcaggaccgcgaggcaagcaagcgggtc
gcgtcgctgagcgcgcgcatcgaggcgctggggatgaacctggcccgccgcgacggtgtg
gcctggctggtggagcaccgcgaacagggattgctcggaccgctgtcgggcctgctgcgc
gtgcacgcgggcttcgaggcggcggtcgcggccgcgctgggcccgctggccgacgccgtc
gccgccgataccggcgagtccgcgcacgccgcgatcgaagcgctcaaggacgccgacggt
ggccgcgccgccgtggtcttcggcaccgacagcggcgagccgccgaagccgggcgccttg
cccggcggcgcccgctggctggtcgacgtggtggagtgccccgacccggtgcgcggcgcg
atcgcggcgctgacctcgggaaccgccgtggccgacgacctgccgtccgcccgcgcgctg
gtcgcggcgcggcccgagctgcgtgtggtcacccgcgacggcgatctcgccggaaacggc
tggctgctcggtggttcggatcgcgcgcccagccagctggagatccaggccgacatcgat
gccgcccgggccgaactggtcgccgcgcagcgccgcgccgaggaactcgaggccgcgctg
tccggcgcgctcgaggaacagtccgaccgcaaggacgccgtcgaccaggcgctgctcgcg
ctgcacgaatccgatcaggcgctggtcgcgatctacgaacggctgggcaggctcggccag
accgcccgcactgcgcacgcggagagcgaacggctcctcggccagcgcgacgacgcggag
gccggccgggaagaggcgctggcctcgctggccgagctggaggatcgcctgcggcacgcg
gagctcgaacaatccgaggtggacgccgacggtgcgggcgcggcgggcaccgaatccgcg
ggccgcgcacgcgaggaggcggcggccgcgctggccgaggcgcgcgcgatggaggtcgag
gccaggcttgccgtgcgcaccgccgaggaacgagcggaatccgtacgcggcaaggcggat
tcgctacgccgcgccgcgcgcgccgaacgggagaaccgggcgcgggccgaacgcgcccag
gccgcgcgcaagaaggcggcggaggtggccgccgcggtcgccgaatccggtgcgaagatc
gccgccgagctggagcgcgtcgtcggggaggcgggcgctcggcgcgacgaactggtgcgc
aggcgctcggagtgcgccgcacaggtcgagcaggtcaaggagcgggtgcgcgcgctcacc
gcgcagctgtcccagctcaccgacgcggtgcaccgggacgaggtggcgaaagcccaagcc
gcgctgcgcatcgagcaactggaggcgaccatcgccgagcagttcggcatcgctctggac
gacctgatcgccgaatacgggccggatgtgccgctgccgccctcggcgctggagatgcag
gagtacgagcaggccaaggagcggggcgagcaggtcagcgagcccgccccgatgccgtac
gaccggcagacccaggagcgccgtgccaagcgcgcggagaaggacctcgccaccctgggc
aaggtgaatcccttggcgctggaggaattcgcggcgctggaggagcgctacaacttcctc
gccacccaactggaggacgtcaagagcgcgcgcaaggatctcctggacgtggtcgccgag
gtcgatgcccgcatcctccaggtgttcaccgaggcatacgccgatgtggagcgcgagttc
gtcgaggtgttcgcgaagctgttccccggtggcgagggcaggctgctgctcaccgacccc
tcggacatgctcaccaccggcatcgaggtggaggcccggccgccgggcaagaaggtcaag
cggctgtccctgctgtccggcggcgagaagtcgctgaccgcggtcgcgttgctggtggcg
atcttccgcgcccggccctcgccgttctatgtgatggacgaggtcgaggcggcgctggac
gacaccaacctgcgccgcctgatcggcctgttcgagcagttgcgggagaagagccagctg
atcgtcatcacccaccagaagccgacgatggagatcgccgacgcgctctacggcgtcagc
atgcgcggcgacggcatcacccaggtgatctctcagcggctgcgcggggagaacctggcc
ccggtgggctga
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