Nocardia sputorum: IFM12276_14980
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Entry
IFM12276_14980 CDS
T09151
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nspu
Nocardia sputorum
Pathway
nspu02024
Quorum sensing
nspu03060
Protein export
nspu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IFM12276_14980 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IFM12276_14980 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IFM12276_14980 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nspu02044
]
IFM12276_14980 (ffh)
Enzymes [BR:
nspu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IFM12276_14980 (ffh)
Secretion system [BR:
nspu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IFM12276_14980 (ffh)
Eukaryotic Sec-SRP protein
IFM12276_14980 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_31
APS_kinase
Zeta_toxin
AAA_24
AAA_16
AAA_22
AAA_18
TctA
AAA_33
MobB
NACHT
NTPase_1
AAA_5
ABC_tran
AAA_30
Thymidylate_kin
NPHP3_N
6PF2K
TsaE
AAA_25
Mg_chelatase
NB-ARC
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
BDT98469
UniProt:
A0ABN6TZT3
LinkDB
All DBs
Position
1653389..1654942
Genome browser
AA seq
517 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLSPADIDATCREIRLALLEADVALPVVRGFIGRIKERAK
GAEVSAALNPAQQVVKIVNEELIGILGGETRRLNLAKNPPTVVMLAGLQGSGKTTLAGKL
AKLLKGQGHQPLLVACDLQRPGAVTQLQVVGERAGVPVYAPHPGTSVGGGENPLGISAAD
PVNVARGGVEEARQKQYDVVIVDTAGRLGIDEELMRQAAGIRDAVQPDETLFVLDAMIGQ
DAVNTAEAFRDGVGFTGVVLTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHP
DRMASRILGMGDVLTLIEQAEQVYDAKQAEEAARKIGSGELTLEDFLDQMLAIRKMGPIG
NLLGMLPGAGQMKDVLAQVDDKQLDRVQAIIRGMTPAERANPKIINASRRLRIANGSGVQ
VSEVNQLVDRFFEAKKMMAMMGRQMGLPGSRRGNAKKGKKGKKGGRGPTPPKVRGGFPGM
GGMPAGMPDLSNMPAGLDQLPPGLEGFDLSKLKFPKK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctgtccgaccggcttaccggtgccctcaaggatctgcgcggtaagggg
cgtctgtcaccggccgacatcgacgccacctgccgcgagatccgcctggccctgctggag
gccgacgtcgcgctgcccgtggtccgcggattcatcgggcggatcaaggagcgcgccaag
ggcgccgaggtcagcgcggcgctgaacccggcgcagcaggtcgtgaagatcgtcaacgag
gaactgatcggcatcctcggcggcgagaccaggcggctgaacctggccaagaacccgccg
accgtggtcatgctggccggtctgcagggttccggtaagaccacgctcgcgggcaagctg
gcgaaactgctgaaggggcaaggccaccagccactgctggtggcgtgtgacctgcagcgt
cccggcgccgtcacccagctgcaagtggtcggcgagcgtgcgggcgtacccgtctacgcg
ccgcaccccggcacgtccgtcggcggcggggagaacccgctgggcatctcggccgccgat
ccggtgaacgtggcgcgcggcggcgtcgaggaggctcggcagaagcagtacgacgtcgtc
atcgtcgacaccgcgggccgtctcggtatcgacgaggagctgatgcgccaggcggcgggc
atccgcgacgccgtgcaaccggacgagactctgttcgtcctcgacgcgatgatcggccag
gacgcggtcaacaccgccgaggcgttccgcgacggcgtcggcttcaccggcgtcgtgctc
accaaactcgacggcgacgcccgcggcggtgcggcgctgagtgtccgcgaggtcaccggt
gtgccgatcctgttcgcctcgaccggtgagaagctcgaggacttcgacgtcttccacccg
gatcgcatggccagccgcatcctcggcatgggtgacgtgctcaccctgatcgagcaggcc
gaacaggtctacgacgccaagcaggccgaggaggccgcccgtaagatcggcagcggcgag
ctgacgctcgaggacttcctcgaccagatgctggccatccgcaagatgggcccgatcggc
aacctgctcggcatgctgccgggcgccggtcagatgaaggacgtgctcgcccaggtcgac
gacaagcagctcgaccgcgtgcaggcgatcatccgcggcatgaccccggccgaacgggcc
aacccgaagatcatcaacgcctcgcgccgcctgcgcatcgccaacggttccggagtccag
gtctccgaggtcaaccagctcgtcgaccgcttcttcgaggccaagaagatgatggcgatg
atgggccgccagatgggcctgcccggctcccgccgcggcaacgcgaagaagggcaagaag
ggcaagaagggcggtcgtggccccacgccgccgaaggtacgcggcggcttcccggggatg
ggcggcatgcccgccgggatgcccgacctgtccaacatgcccgccggtctcgaccagctg
ccgcccgggttggaaggattcgacctcagcaagctgaagttcccgaagaagtag
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