Nocardia sputorum: IFM12276_16280
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Entry
IFM12276_16280 CDS
T09151
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nspu03016
]
IFM12276_16280 (truB)
Enzymes [BR:
nspu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IFM12276_16280 (truB)
Transfer RNA biogenesis [BR:
nspu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IFM12276_16280 (truB)
Prokaryotic type
IFM12276_16280 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BDT98599
UniProt:
A0ABM8CUF6
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All DBs
Position
1782173..1783072
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AA seq
299 aa
AA seq
DB search
MDGLGGLLVIDKAGGWTSHDVVAKCRRLLHTKKIGHAGTLDPMATGVLVLGVERATKLLG
LLTLTTKAYTATIRLGQATSTDDAEGEVLTTIPSGHLVDDDIAARTAELTGDIDQVPATV
SAIKVNGERAYARHRAGEEVQLAPRPVTVSRFDVLTRRDVGDFVDLDVVVECSSGTYVRA
LARDLGAALGVGGHLTALRRTRVGPFTLEHARTLDELAAAAESGVPPLSLDMDAAVRTAF
PLRDIDEKQADDLRNGRWLEPAGIAGVYAAIDPEGRSIALLRESGKRAASVMVVRPSNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacggactcggcgggctgctcgtcatcgacaaggccggcggctggaccagccacgac
gtcgtcgcgaaatgccgaaggctgctgcataccaagaagatcggccatgccggaaccctc
gacccgatggcgaccggcgtgctggtgctcggtgtggaacgcgcgaccaaactgctcggc
ctgctcaccttgacgaccaaggcgtacaccgcgaccatccggctcggacaggccaccagc
accgacgacgccgaaggcgaggtgctcacgacgatcccgtccggtcacctcgtcgacgac
gacatcgccgcgcgtaccgcggaattgaccggcgacatcgaccaagtgcctgccaccgtg
agcgcgatcaaggtgaacggcgagcgcgcttacgcccgccaccgtgcgggcgaagaggtg
cagttggccccgcgtccggtcacggtgtcgcggttcgacgtgctcacccggcgcgacgtc
ggcgatttcgtcgacctggacgtggtggtcgagtgctcctcgggcacctatgtgcgggcg
ctggccagggacctgggcgccgcgctcggcgtcggcggccacttgaccgcgttgcgccgg
accagggtcggtccgttcacgctcgaacacgcccgcaccctggacgagttggccgccgcc
gcggagtcgggcgtgccgccgctgagtctcgacatggacgccgcggtccgaaccgcgttc
ccgctccgggacatcgacgaaaagcaagccgacgacctgcgcaacggccgctggctcgaa
cccgccgggatagccggtgtgtatgccgccatcgacccggaaggccgttcgatcgcgctg
ctgcgggaaagcggaaagcgagccgcatccgtcatggtggtacgcccgtccaacctttga
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