KEGG   Nocardia sputorum: IFM12276_16640
Entry
IFM12276_16640    CDS       T09151                                 
Symbol
sigB_1
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
nspu  Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:nspu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nspu03021]
    IFM12276_16640 (sigB_1)
Transcription machinery [BR:nspu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     IFM12276_16640 (sigB_1)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 KORA HTH_23 HTH_Crp_2 GerE HTH_3 Sigma70_ECF Trp_repressor HTH_Tnp_4 HTH_31 Trypco1 HTH_28
Other DBs
NCBI-ProteinID: BDT98635
UniProt: A0ABN6U068
LinkDB
Position
1815299..1816120
AA seq 273 aa
MSLATANRRTATPRRTRRGTDSYDGIEPLLEKLAAMDENDPERPRLREAIMRRCLPLAEH
IARRFVGRGENYDDLYQIAAVGLVLAVDRFDPARGPSFLSFAVPTIMGEVRRHFRDHSWA
VRVPRRIKEIQLTIGPAVERLSQRLERMPTALEIAVELDIDLTEVTQALLAGNAYSTNSI
DAVIEDDDSGGASVRVAETFGEEDPSYDLTDEALAVAPLLAELPERERLVLRMRFFEGRT
QAQIAAVLGVSQMHISRVLSRTLTDLRERALRD
NT seq 822 nt   +upstreamnt  +downstreamnt
atgtcactcgcgaccgccaaccgcaggaccgccacgccgcgccggacgcggcgcggaacg
gacagctacgacggcatcgaaccattgctcgagaaattggccgcgatggacgagaacgat
cccgaacggccgcgactgcgggaagcgatcatgcgccggtgcctgccgctggccgagcac
atcgcccgacgcttcgtcggccgcggggagaactacgacgatctgtaccagatcgccgcc
gtggggctggtgctcgcggtcgaccgcttcgacccggcgcggggaccgtcgttcctgtcg
ttcgcggtacccaccatcatgggcgaggtacgccgccatttccgcgaccacagctgggcg
gtgcgggtgccgcgccggatcaaggagatccagttgaccatcggcccggcggtggagcgg
ctctcccagcgattggaacggatgcccaccgcgctggagatcgcggtcgaactcgacatc
gacctgaccgaggtcacccaagcgttgctggcaggcaacgcctactccacgaactccatc
gacgcggtcatcgaggacgacgacagcggcggcgcctcggtgcgcgtcgcggagacgttc
ggcgaggaggatccctcctacgacctgaccgacgaggccctcgcggtcgctccattgctc
gccgagctgcccgagcgggagcggctcgtgctgcgcatgcgcttcttcgaggggcgtacg
caggcgcagatcgccgccgtgctgggcgtctcccagatgcatatctcccgcgtcttgtcg
cggaccctcaccgaccttcgggagcgtgccctgcgcgactga

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