Nocardia sputorum: IFM12276_17840
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Entry
IFM12276_17840 CDS
T09151
Symbol
mysB
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nspu03021
]
IFM12276_17840 (mysB)
Transcription machinery [BR:
nspu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IFM12276_17840 (mysB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BDT98755
LinkDB
All DBs
Position
complement(1930115..1931083)
Genome browser
AA seq
322 aa
AA seq
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MTSPATTRVRTSDSDLDAQSPAADLVRVYLNGIGRTALLTAADEVELAKRIEAGLYAQYL
LETGKRLSATRKRDLAIIVRDGQAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNL
GLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREL
HQQLGREATDEELATESGIPVDKISDLLDHSRDPVSLDMPVGNDEEAPLGDFIEDSEATS
AESAVIAGLLHHDVRSVLATLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQI
EREVMAKLRKGERADRLRAYAS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccccgccaccactcgtgtgcgcaccagcgattcggacctcgacgctcagagc
cctgccgccgacctggtacgtgtgtacctgaacgggatcggccgcaccgcgctgctcacc
gctgcggacgaggtcgagctggccaagcgcatcgaggcgggcctctacgcgcagtacttg
ctggagaccggcaagcgactgtcggcgacccgcaagcgtgatctcgcgatcatcgtgcgc
gacggtcaggccgcccggtcccacttgctggaagccaacctgcgtctcgttgtctcgctc
gccaagcgttacaccggccgcggcatgccgctgctggacctgatccaagagggcaacctc
gggttgatccgcgccatggagaagttcgactacgccaagggcttcaagttctccacctac
gccacctggtggatccggcaggccatcacccgcggcatggccgaccagagccgcaccatc
cggctccccgtccacctcgtcgagcaggtgaacaaactggccaggatcaagcgtgaactg
caccagcagctgggacgcgaggccaccgacgaggaattggccaccgaatcgggcatcccg
gtcgacaagatctccgatctgctcgaccacagccgcgacccggtgagcctggacatgccc
gtcggcaacgacgaagaggcaccgctgggcgatttcatcgaggattccgaggccacctcg
gccgagtccgcggtcatcgccggtctgctgcaccacgatgtgcgcagcgtgctcgccacc
ttggacgagcgcgagcagcaggtcatcaggctgcggttcggcctggacgacggccagccg
cgcacgctggaccagatcggcaagctcttcggtctgtcccgcgagcgggtgcgtcagata
gagcgtgaagtcatggcgaagctgcgcaagggcgagcgggccgaccggctccgcgcctac
gccagctga
DBGET
integrated database retrieval system
