Nocardia sputorum: IFM12276_19790
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Entry
IFM12276_19790 CDS
T09151
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nspu
Nocardia sputorum
Pathway
nspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IFM12276_19790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_19790
Enzymes [BR:
nspu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFM12276_19790
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IFM12276_19790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
C1_1
Motif
Other DBs
NCBI-ProteinID:
BDT98950
UniProt:
A0ABN6U131
LinkDB
All DBs
Position
2124632..2127106
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AA seq
824 aa
AA seq
DB search
MNEPAADTSATEADGPAAGTPGVALPIARVLPLLSPAHLDRDFDYLVPPELDEIAQPGVR
VRVRFAGRLVDGYLLARSAHSDHGGKLVKLERVVSGERVLTPEILELADKVAARYAGTRA
DVLRLAIPPRHARTEIGGKKKSGGAQDNSDDPTGPSSASPGTSGGAGGAGMSCEPAVSVQ
NADTNSTPAALPRTPRPADSAVSQADSVDVSHETAREPTETVDAAEPGDPDPASWDTARD
AGSPEGDTAALEGQSSSAPIEPRSEGGGVPAATGSGAETGCADSALEAVDLAAWERYVHG
SAFVGALAQAKGARAAWQALPGEDWPRRLAELAAVVARQGRSAILMVPDQRDLDRVLAEC
VRLVGDSAVGLAAGLGPAARYRRWLAVLRGSARVVVGTRSAVFAPAGELGLIALWDDGDD
TYAEPRAPYPHTREVAMLRAHETGAAFVAAGFARTAEIQAVVDSGWAHDLVADRAVLRKA
APRISAPGDSDLALERDPVARAVRIPGVAFAAARAALKEGAPVLVQVPRRGYIPALACGK
CRTPARCRHCNGPLALPGTGRSADAAASAQSPACRWCGITEAAFRCSTCGSRALRAVVIG
AARTAEELGRAFPGVPIRGSGGGTVLDTVEQGPQVVVATVGAEPVAPGGYGVALLLDGWA
LLGRADLRAAEDALRRWMAAAALVRAHGQVVIVAEPSIPTVQALVRWDPVGAARAEVAAR
AEVGFPPAVRLAAIDGTADTIAELLAAADLPDTVDRLGPVPLPDGARKPFSSGDAPAEVE
RLLLRVERRRGSALARALRAAQAVRSTHRSDAPLRVQIDPVDIG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacccgcggcggacacctccgccaccgaggcggacggtccggccgcgggtacc
ccgggcgtggcgctgccgatcgcccgggtgcttccgctgttgtcgccggcgcatctcgac
cgcgacttcgactacctggtgccccccgagctggacgagatcgcccagccgggggtccgg
gtgcgtgtccgtttcgccggtcggctggtcgacgggtatctcctggcgcggtcggcgcac
agtgaccacggcgggaagctggtcaagctcgaacgcgtcgtttccggcgagcgggtgctg
accccggagattctggaactggcggacaaggtggcagcccgctacgcgggtacccgcgcc
gatgtcctgcggcttgccattccaccgcgccatgcccgcacggaaatcggcgggaagaag
aagtccggtggggcacaggacaattccgacgatcccacgggtccctcttctgcttcccct
gggacatcggggggcgccggcggggccgggatgtcatgtgaaccggcggtttccgtgcag
aacgcggacacgaactccacgcccgccgcgttaccccgcactccgcgtcctgcggattct
gctgtgtcgcaagccgattcggtggacgtctcccacgagaccgcgcgagagcctaccgaa
accgtcgacgcggctgagccgggcgatccggaccctgcgagctgggacaccgcccgagat
gcgggctcgcccgagggggacactgctgcgctcgaaggccagtcctcctccgcgccaata
gaaccgcgctccgaaggcggaggggttcccgcggcaaccggcagcggcgcggagacgggc
tgtgcggactcggcgctcgaggccgtggatctcgctgcgtgggagcgttacgtgcacggc
tcggcattcgtcggtgcgctcgcgcaagcgaaaggggcacgcgcggcgtggcaggcactg
cccggcgaggactggccacggcggctggcggaactcgccgccgtggtggcccggcagggg
cgcagcgcgatcctcatggtccccgaccaacgcgacctcgatcgggtgctggcggaatgc
gttcgactggtgggcgactccgccgtcgggctggccgccggcctcggccccgcggcacgg
taccggcgttggctcgcggtgctgcgcggttcggcgcgcgtggtggtcggcacgcggagc
gcggtattcgcacccgcgggtgaactcgggttgatcgcgctgtgggacgacggcgacgac
acctacgccgaaccgcgcgcaccgtatccgcacacgcgcgaggtggcgatgttgcgggca
cacgagacgggagcggcattcgtcgcggcgggtttcgcgcggaccgcggagatccaagcg
gtggtcgattccggctgggcgcacgatctggtcgccgatcgcgcggtgctgcgcaaggcc
gcgccgcgaatcagcgcaccgggtgacagcgatctcgcgttggagcgcgatccggtcgcg
cgtgccgtccggattcccggcgtcgccttcgcggctgcccgcgccgcgttgaaggagggc
gcgccggtgctggtgcaagtgccgcgccgggggtacatccccgcgctggcctgcgggaag
tgtcgtactccggcgcggtgtagacattgcaacggaccgcttgcgctgcccggcaccggc
cgatcggccgatgccgctgcctccgcgcagagccccgcttgccgctggtgcgggatcacc
gaggccgccttccgatgctccacctgcggttcgcgcgcgctgcgcgccgtggtgatcggg
gccgcgcgcacggcggaggaactcggtcgcgcctttcccggcgtgccgatccgtggttcc
ggcggcggcaccgtgctcgacaccgtggagcagggtccgcaggtggtcgtggccacagtc
ggcgccgaacccgtggcccccggcgggtacggcgtcgcgctgctgctcgacggatgggcc
ttgctcggccgcgccgacctgcgagccgccgaggacgcgctgcgccgctggatggccgcc
gcggcgctggtgcgcgcgcacggccaggtcgtcatcgtggccgagccgtccatccccacc
gtgcaggcactggtccgatgggatccggtcggcgcggcgcgcgcggaggtcgcggcgcgg
gccgaggtgggcttcccgcccgcggtccggctcgccgcgatcgacggcaccgccgacacc
atcgccgaactgctcgcggcggcggacctgcccgatacggtcgaccgactcggaccggtg
ccgctgccggacggcgcccgcaaaccgttctcctccggcgatgcgcccgccgaagtcgaa
cgcttgctcctgcgggtggagcgccgccggggatcggcgctcgcgcgtgccctgcgcgcc
gcccaggcggtccgcagcacgcatcgttccgacgccccgctccgcgtgcagatcgacccg
gtcgacataggctga
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