Nocardia sputorum: IFM12276_21080
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Entry
IFM12276_21080 CDS
T09151
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
nspu
Nocardia sputorum
Pathway
nspu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IFM12276_21080 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_21080 (ku)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IFM12276_21080 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Dynamitin
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
BDT99079
LinkDB
All DBs
Position
complement(2249246..2250214)
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AA seq
322 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYTATEDHDIRFHQVHAKDGGRIKYERVCTVCGESVQYTEI
DKAYESPDGDKIVLSDEDFAKLPVAEKHEIPVLQFVPSEQIDPILFEKSYYLEPDSSTPK
AYVLLARTLEKIERTALVYFTLRQKTRLAALRVREGVLVVQTLLWPDEVRSVDFESLDGV
ADPRPQEIKMAETLVEAMSDDFDPEQFTDEYQIELKRLLDEAIASGTGKVPEQPELAPSG
MDAEVVDLVAALQRSLEASGRRTAGGEGAEPKKTAKKAAAKSAGAKSTASKSGASKSAAT
KSTAKKTPAKKAAKKAPTRKGA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgatctggaagggctcgatcgcattcgggctggtgaacgttccggtgaaggtg
tacaccgccaccgaggaccacgacatccggttccatcaggtgcacgccaaggatggaggc
cggatcaaatacgagcgcgtctgcaccgtgtgcggtgaatccgtccagtacaccgagatc
gacaaggcctacgagtccccggacggcgacaagatcgtcctcagtgacgaggacttcgcg
aaactgccggtggccgagaagcacgagatcccggtgctccagttcgtgccgtccgagcag
atcgacccgatcctgttcgagaagagctactacctggaaccggattccagcacgccgaag
gcctacgtcctgctggcgcggacgctggagaagatcgagcgcaccgccctggtgtatttc
acgctgcggcagaagacgcggctggccgcgctgcgcgtgcgtgagggcgttctggtggtc
cagacgctgctgtggccggacgaggtccgctccgtcgacttcgaatccctcgacggtgtc
gccgaccccaggccgcaggagatcaagatggccgagacgctcgtcgaggccatgtccgac
gacttcgatccggagcagttcaccgacgagtaccagatcgaattgaagcgcttgctcgac
gaggcgatcgccagcggcaccggcaaggtgcccgagcagccggagctcgcgccgagcggg
atggacgccgaggtggtcgacctggtcgccgccctgcagcgcagcctggaggcgagcggg
cgcaggaccgcgggtggcgagggcgcggagccgaagaagaccgcgaagaaggccgcggcc
aagagcgccggagccaagagcaccgcgtccaagagcggcgcctcgaagagcgcggccacc
aagagcacggcgaagaagacgcctgcgaagaaggcggccaaaaaggccccgacgcgcaaa
ggcgcctga
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