Nocardia sputorum: IFM12276_21520
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Entry
IFM12276_21520 CDS
T09151
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nspu
Nocardia sputorum
Pathway
nspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IFM12276_21520 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_21520 (recC)
Enzymes [BR:
nspu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IFM12276_21520 (recC)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IFM12276_21520 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BDT99123
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All DBs
Position
2294156..2297524
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AA seq
1122 aa
AA seq
DB search
MPLHIHRAERADVLARALADVLASPLDDPLAAEVVAVPAKGVERWLTQTLSEVLGADGSA
DGVCANIAFPSPAALVAEALAAASGVAPAEDPWAPDRAVWTLLRVIDGSLSEPWCAVLAR
HLGARAAAGDEHRVGRRYATAARITALFDSYAAQRPALITEWAAGLDTDGAGGAVPDDLL
WQPMLWRGLRAEIGAPSPAERLEAACARLRARPDLVALPPRLSLFGVTRLPSDQLAVLSA
LAAARDVHLWLVHPSPVLWSALNGVPAARTRAEDHSARAVAHPLLAGLARDVRELQQRLT
AAIGSDTYHPLGSASSGNLATEDDSHATLLRALQRGIRDDRWPPAPGEAAADGTVQVHAC
HGPARQVEVLRECLLGRFAADETLEPRDVLIMCPEVQAYAPLIRAAFGQRSTGTPEPQAD
SEHPAHRLRVRLADRGRGVTNPLLAVIGVLLELADGRVTATQVLDLAAAEAVRRRCGFDD
DDIERLREWAAESGARWGIGQRQRQAFGLADFAQNTLNSAVDRILLGVTAGETSDDWLDL
ALPLDDVDSNDVDLAGRFAEFVDRLAVCLRDLRGPRPAHEWAAVLGRALDLLTDVPDAQA
WVRTEARQELAAATDHAGEVSLRLTDVGVLLRSRLAARPTRANFRTGELTVCTMVPMRSV
PHRVVVLLGLDDEMFPRASAADGDDVLAREPLIGERDPRSEDRQLLLDAILAARDTLLVF
HTGADPVTGAHRPPAIPVAELLDALRAHVGAAAMRAVVTRHPLQSFDRRNFRAEQPFSFD
TVALAGAYAADGPVRPRPGFLAGPLPAAEAADVALADLISFAEHPVRAFLWQRLGLRVPE
HEEDIADRLPIELDGLAKWELGERLLAARLTGADPAGLRAAEWRRGTLPPFGFGAAVLDE
VEHTVDRLVRAAQADYAGSARAVDIAVDLGNGRRLTGTVPEVRGDVLVRTTFSRLAPKHR
IAAWVSLLALTVTEDRSWRAVSTGRGQFGRPTWRSELAAPDVPAAREALRQLVALRDAGL
TEPLPVAPAASALYAERRFRGAGAEDAIAAAEREFNGGPNGPGPFGDHTDRHLRYVWGPA
PRLEDLMAAPAAAGEPGESSRFGALARRMWFPLLAAESQGQP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcacatccaccgtgccgagcgcgccgacgtcctggcccgggcgctcgccgat
gtgctggcctcgccgctggacgacccgctcgcggccgaggtggtcgcggtgcccgcgaag
ggggtcgagcgctggctgacgcagacgctctcggaggtgctcggcgcggacggctcggcc
gacggcgtgtgcgcgaacatcgccttcccctcgcccgccgcgctggtcgccgaggcgctg
gcggcggcgagcggagtggcgcccgccgaggatccctgggcgccggaccgcgcggtgtgg
acgctgctgcgggtgatcgacgggtcgttgtccgagccgtggtgcgccgtactggccagg
cacctcggcgcgcgggccgccgcgggcgacgagcaccgcgtcggccggcgctacgcgacg
gcggcgcggatcaccgcgctgttcgacagctatgccgcccagcggcccgcgctgatcacc
gaatgggcggccggcctggacaccgacggcgcgggcggcgcggtacccgacgacctgctc
tggcagccgatgctgtggcgcgggctgcgcgcggagatcggggcgccgagcccggccgag
cggctcgaggccgcctgcgcgcggctgcgcgcgcggccggatctggtcgcgttgccaccg
cggctgtcgctgttcggcgtgacccggttgcccagcgaccagctcgccgtgctgtcggcg
ctggccgccgcccgcgacgtccacttgtggctcgtgcatccgagcccggtcctgtggtcg
gcgctgaacggagtgcccgccgcccggactcgagccgaggatcacagcgccagggcggtc
gcccatccactgctggcggggctggcgcgcgacgtgcgggagttgcagcagcggttgacc
gccgccatcggctccgacacatatcacccgctcggctcggcgagctcgggtaaccttgcg
acggaagacgattcgcacgcgacattgctgcgcgcactgcagcggggcatccgggacgac
cggtggccgcctgcgccaggggaggcggccgccgacggcaccgtgcaggtgcacgcgtgt
cacggccccgcgcgacaggtcgaggtgctacgggaatgcctgctcgggcggttcgcggcc
gacgagacgctggagccgcgcgacgtgctgatcatgtgcccggaggtgcaggcgtacgca
ccgctgatacgggcggcgttcgggcagcgctcgacgggaacgcccgagccgcaggccgat
tcggagcatccggcgcaccggctgcgggtgcggctggccgaccgggggcgcggggtgacc
aatccgctgctcgcggtgatcggagtcctgctcgagctggccgacggccgggtgacggcg
acccaggtactcgatctcgcggccgccgaagcggtccgtcgccgttgcggattcgacgac
gacgacatcgagcggctgcgcgaatgggcggccgagtccggggccagatggggcatcggg
caacggcagcgccaagcgttcgggctcgccgatttcgcgcagaacacgctcaacagcgcg
gtggaccggatcctgctgggcgtcaccgcgggtgagacctccgacgactggctggatctc
gcgctgcccctggacgacgtggacagcaacgacgtggacctggccggacgcttcgcggag
ttcgtcgaccggctcgcggtgtgcctgcgcgacctgcgcggcccccggcccgcgcacgag
tgggcggcggtgctcggccgcgcgctggatctgctgaccgacgtgccggacgcgcaggcg
tgggtgcgcaccgaggccaggcaggaactcgccgccgccaccgaccacgcgggcgaggtg
tcgttgcggctgaccgatgtcggcgtgctgctgcggtcgcggctggcggcgcgccccacc
cgggccaacttccgcaccggcgagctgaccgtctgcaccatggtgccgatgcggtcggtg
ccgcaccgggtcgtggtgctgctcgggctggacgacgagatgttcccgcgcgcgagcgcc
gcggacggtgacgacgtgctggcccgggaaccgctgatcggcgaacgggatccgcgcagc
gaggaccggcaactgctgctggacgcgatcctcgcggcccgggacacgctgctggtgttc
cacaccggcgccgatccggtcaccggggcgcaccgaccgcccgccatcccggtcgccgag
ttgctggacgcgctgcgggcccacgtcggcgcggcggcgatgcgcgcggtggtgacccgg
catccgctgcaatccttcgatcggcggaacttccgggccgagcagccgttcagcttcgac
accgtggccttggccggcgcctacgcggcggacggacccgtgcgcccgcggccgggattc
ctggccggcccgctgcccgcggcggaggcggcggacgtcgcgctggccgacctcatctcc
ttcgccgagcacccggtgcgcgcgttcctgtggcagcgcctcggcctgcgggtgcccgag
cacgaggaggacatcgccgaccggctgcccatcgagctcgacggcctggccaagtgggag
ctgggcgaacgcctgctcgcggcccgcctcaccggcgcggacccggccgggctgcgggcg
gcggaatggcggcgcggcacgctgccgcccttcggattcggcgccgccgtgctcgacgag
gtcgagcacaccgtggaccggttggtgcgagccgcgcaggcggactacgcgggctcggcg
cgcgcggtggacatcgcggtcgacctgggcaacggacgacggctcaccggcaccgtgccc
gaggtgcgcggggacgtgctggtccgcaccaccttctcccggctggctcccaaacaccgg
atcgcggcgtgggtttcgctgcttgcgctgaccgtcaccgaggaccggtcgtggcgggcg
gtgagcaccggccgcggacagttcggccgtcctacctggcgcagcgaactcgccgcgccc
gatgtgcccgcggccagggaagccctgcgtcagctcgtcgcactgcgcgacgcgggcctg
accgaaccgctgccggtcgcgccggccgcctccgcgttatacgccgagcgccggttccgc
ggcgcgggcgccgaagacgcgatcgccgcggcggagcgcgaattcaacggcgggcccaac
ggtcccgggccgttcggcgaccacaccgaccgccatctgcgctacgtctggggtccggcg
ccccggctcgaggacctcatggccgcgcccgccgcggcgggcgagcccggggagagcagc
cggttcggcgcgctggcccggcggatgtggtttccgttgctggccgcggaaagtcagggt
cagccgtga
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