Nocardia sputorum: IFM12276_22230
Help
Entry
IFM12276_22230 CDS
T09151
Symbol
topA_2
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nspu03032
]
IFM12276_22230 (topA_2)
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_22230 (topA_2)
Enzymes [BR:
nspu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IFM12276_22230 (topA_2)
DNA replication proteins [BR:
nspu03032
]
Prokaryotic type
DNA Topoisomerases
IFM12276_22230 (topA_2)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IFM12276_22230 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BDT99194
LinkDB
All DBs
Position
2379090..2380097
Genome browser
AA seq
335 aa
AA seq
DB search
MRLRRSRPYDGGVERVRRGRGFSYRTADGAPVRDDETLERIRGLAIPPAWRKVWICPHDN
GHIQAVGVDAAGRRQYLYHEQWRKERDEEKFDRVLALAGRLPEIRAQVREDLALRGLTRP
RVEAVAVDLVDRGVFRVGGEEYAEEHGTRGVATLLREQVEVSGDRMLFDYLAKGGIRRRV
SVRDALLAKAVRSLLRSKADSDRLLVYRDGSRYGELRADDINSRFRELAACECSVKDLRT
WQATVLAAAAFGSIERPAGRRARRTAVREVMDEVAAALGNTPAVAQASYVDPRVVTAFEN
GTTVAAALRRAKRAESADAERAIIDSAVIRMLRRM
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcgccgtagccgaccgtacgacggcggagtcgagcgcgtccggcgcgggcgc
ggattcagctaccgcaccgcggacggcgcacccgtgcgcgacgacgagacgttggagcgc
atccgcgggctggcgatcccaccggcctggcgcaaggtgtggatctgcccgcacgacaac
ggtcacatccaggccgtcggcgtcgatgccgcggggcggcgccagtacctgtaccacgag
cagtggcgcaaagagcgcgacgaggagaagttcgaccgggttttggccctggccgggcgc
ttgccggagatccgcgcccaggtgcgggaagacctcgcgttgcgcggcctgacccggccg
cgggtggaggcggtggccgtcgacctggtcgatcgcggagtgttccgagtcggaggcgag
gagtacgccgaggagcacggcacccggggagtcgcgacgctgctgcgtgagcaggtcgag
gtgtccggggatcgaatgcttttcgactatctcgccaagggcggcatccggcgccgcgtg
agcgtccgagatgcgctgctggccaaagcggttcgatcgctgctgcgcagcaaagcggat
tccgatcggctcttggtgtaccgggacggcagccgttacggcgaactgcgcgccgacgac
atcaactcgcgcttccgcgaactcgccgcctgcgagtgcagcgtcaaagacttgcgcacc
tggcaggccaccgtcctcgcggcggccgcgttcggttcgatcgaacgtccggccggtcgc
cgggcgcgcaggaccgcggtgcgggaggtcatggacgaggtcgccgccgccctcggcaac
acccctgcggtcgcccaggcgtcgtatgtcgacccacgggtcgtgacggcattcgagaac
ggcacgaccgtcgccgcggcactgcggcgcgcgaagcgggccgagtcggccgatgcggag
cgggcgatcatcgacagcgccgtaattcgtatgctccgccggatgtga
DBGET
integrated database retrieval system
