Nocardia sputorum: IFM12276_28910
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Entry
IFM12276_28910 CDS
T09151
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_28910
Enzymes [BR:
nspu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IFM12276_28910
DNA repair and recombination proteins [BR:
nspu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IFM12276_28910
Prokaryotic type
IFM12276_28910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
BDT99862
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All DBs
Position
3127029..3128324
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AA seq
431 aa
AA seq
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MAVTIALFTRDLRVHDNPALLAAVREGAAVIPLYVVDDRIVGSARPAGNKLRFLSAALAE
LDAELRCAGGQLVVRHGDYVDAVDRVAAQVHADSVHIAEDATWSSRCRLRALRERLERRS
CLLHIHPATLTAVDPADCVQHRPDDEVPDFATYFRRWLAAPKRRPLGKPTELIVPRVDSD
PVPRFDELGDALISPQLAVGGEITGRALWRGCTADRRQPRGRSNGDLTREGCARLSPYLY
FGCLSAAEMAYHTDMATTDGRAFVRQLARRDFHLQFLVARADIARSGDRPDERQAQDPVV
VGAWRDGRTGYPIVDAGMRQLAAQGWMPERARVIAAGFLTTTLRVDWRIGAEHFRRWLLD
DAASDRLTWQQAGRFDPAAVGSAERYDPDGDYVRRWIPELASLPGSEIHRPWRHSVPTSV
YPAPITGTVNA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaacaatcgcactcttcacccgtgacctgcgcgtccacgacaatccggccctg
ctggccgccgtacgcgagggcgcggcggtgattccgctctacgtcgtcgacgaccgcatc
gtcggcagcgcccgaccggccgggaacaaactccgcttcctctccgccgcgctggccgaa
ctcgacgccgaactccgctgcgccggagggcaactggtggttcggcacggagactacgtc
gacgcggtggatcgggtggccgcacaggtacatgccgacagcgtccacatcgccgaggac
gccacctggtccagccgctgccggctccgggcgctacgcgaacggctggagcgccgcagc
tgcctgctgcacatccatccggccaccctcaccgccgtggatcccgccgactgcgtccag
caccggccggacgacgaggttcccgacttcgcgacgtacttccgccgctggctggcggcg
ccgaagcgacgtccgctgggcaagcccacggaattgatcgtcccccgtgtcgacagtgat
cccgtgccgagattcgacgaactcggcgacgcgctcatctcaccgcagctggcggtggga
ggggagatcacgggtcgtgcactgtggcggggctgcaccgccgaccggcggcaaccacgc
ggccggtcgaatggtgacctcacccgcgagggatgcgcgcgcctgtcgccgtacctgtat
ttcggttgcttgtccgccgccgaaatggcgtaccacaccgacatggcgacgacggatgga
cgcgcgttcgtccgccagctcgctcggcgcgacttccatctgcaattcctcgtcgcccgg
gccgacatcgcgcggtccggggatcgtccggacgagcggcaggcgcaggacccggtcgtc
gtcggcgcctggcgcgacggccgcaccggatatccgatcgtcgacgcgggcatgcggcaa
ctggccgcgcaaggatggatgccggagcgcgcccgcgtgatcgccgccggtttcctcacc
acgacgctgcgcgtggactggcggatcggcgcggagcatttccgccggtggctgctcgac
gacgccgcgagcgaccggttgacctggcagcaggcagggcgtttcgaccccgcggccgtc
ggcagcgccgaacgctacgatccggacggagactacgtgcggcgctggatcccggaactg
gcttcgctgccgggttcggagatccatcgcccgtggcgccacagcgtgccgacctcggtc
tatcccgcacccatcacgggcaccgtcaacgcctga
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