Nocardia sputorum: IFM12276_34250
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Entry
IFM12276_34250 CDS
T09151
Name
(GenBank) AraC family transcriptional regulator
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nspu03000
]
IFM12276_34250
Transcription factors [BR:
nspu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IFM12276_34250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
HTH_Tnp_ISL3
TetR_N
HTH_Crp_2
HTH_11
GATase_3
Motif
Other DBs
NCBI-ProteinID:
BDU00397
UniProt:
A0ABM8CZC2
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All DBs
Position
3729648..3730583
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AA seq
311 aa
AA seq
DB search
MHRVVALVRPVQSTFELGCAAEVFGTRRAGVPQYYEFEVCTETPGPVPTTSGYALSVSRG
LSALASADTVLIPGWAPVEAPLSTRVRRALLRAHARGARLVTICSGVFALARTGLLDGRS
ATTHWARAAQLEREFPQVRVEPDVLYVDHGDVATSAGAGAGIDLCLHLVRRDHGAAHAAL
IARHMVMPPHREGGQAQYAPPPPPADALDGLLEWAGARLGAPLSVRDLAAYLSVSPRTLT
RRFADQLGTSPGAWLLSRRVAEARTLLEETDLPVETIAARVGLTSAVNLRRRFRAQVGTT
PGAYRRAFRGS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtgtggtggccctggtgcggccggtgcagtcgacattcgaactcggttgcgcg
gccgaggtgttcggcacgcggcgggccggggtgccgcagtactacgaattcgaggtgtgc
acggagacgcccggcccggtgccgacgacgtccgggtacgcactgtcggtgtcgcgggga
ctgtccgccctcgcttccgcggacaccgtgctgatcccgggctgggcgccggtggaggcg
ccgctgtccacccgggtgcgccgcgcgctgctgcgggcacacgcgcgcggggcgcggctg
gtcaccatctgctccggggtcttcgcactggcccgtacgggcctgctggacggacgctcg
gcgacgacgcactgggcgcgcgccgcacagctggagcgagagttcccccaggtgcgcgtg
gagccggacgtactctacgtggaccacggtgacgtcgccacgagcgccggagcgggcgcg
ggcatcgacctgtgcctgcacctggtccggcgggatcacggggcggcgcacgccgcgctg
atcgcgcgccacatggtgatgccaccgcaccgcgagggcggccaggcacagtacgcgcca
cctccgccgcccgcggacgcgctggacgggctgctcgagtgggccggcgcgcgcctcggg
gcaccgctgtcggtgcgcgatctggccgcgtatctcagcgtctcgcctcgcacgctcacc
cggcgcttcgccgatcagctcggcacgagcccgggtgcgtggctgctgtcgcggcgggtg
gccgaggcccgcaccctcctggaggagaccgacctgccggtggagacgatcgcggcgcgc
gtcggcctgacttcggcggtcaacctgcgccgccgcttccgcgcccaggtgggcacgacg
ccgggcgcctaccggcgcgcgttccggggctcgtga
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