Nocardia sputorum: IFM12276_42870
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Entry
IFM12276_42870 CDS
T09151
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
nspu
Nocardia sputorum
Pathway
nspu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IFM12276_42870 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_42870 (uvrA)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IFM12276_42870 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IFM12276_42870 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_21
AAA_16
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
ExoX-like_C
NACHT
Viral_helicase1
cobW
ScfRs
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
BDU01259
UniProt:
A0ABM8D1N9
LinkDB
All DBs
Position
complement(4710270..4713221)
Genome browser
AA seq
983 aa
AA seq
DB search
MAERLTVRGAREHNLKGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGELIAKQTPQQIVDQVLAMEEGIRFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV
DGVVYPLTDPPKLKKQEKHDVEVVVDRLAVKPTSKQRLTDSIETALRLADGIVVLDFVDR
DEHAHDRERRFSERLACPNGHPLDIEDLEPRSFSFNSPYGACPDCTGLGIRKEVDPELVV
PDPALSLNEGAIAPWSRGQTAEYFTRLLSGLADSIGFSMDTPWQDLPLKARKAVLEGSAD
QVHVSYTNRYGRKRSYYADFEGVMPFLQRRMESTESEQMKEHYDGYMRDIPCPVCNGARL
RPEILAVTIAANGDKKSIADVSDLSIGECSAFLNSLTLGEREAAIAGQVLKEVQARLGFL
LDVGLEYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIET
LTRLRNLGNTLIVVEHDEDTIRASDWVVDIGPFAGEHGGTVVHSGPYEELLTDPNSLTGA
YLSGRERIEVPLVRRPVTKKRQLTVVGANEHNLKGIDVAFPLGVLTSVTGVSGSGKSTLV
NDILATVLANRLNGARQVPGRHTRVNGLDHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARY
NRETLEVHYKGKTIAEVLDMSIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQSAPTLS
GGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLNVINGLVDKGNTVIVIEHN
LDVIKTSDWVIDMGPEGGSGGGTVVAEGTPEEVAAVAHSYTGQFLKEVLDQPPAPRSAAK
KAPVKKAAAKAAKRPVKKAAAVG
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaacgcctcactgtgcgcggagctcgggagcacaacctcaagggtgtcgatctc
gacctgccccgcgacagcctcatcgtgttcaccggcctgtccggctccggcaagtcgagc
ctggccttcgacacgatcttcgcggaggggcagcggcgctatgtcgagtcgctgtcggcg
tacgcgcggcagttcctcgggcagatggacaagcccgacgtcgacttcatcgagggcctg
tcgcccgcggtgtccatcgaccagaagtcgaccaaccgcaatccgcgctcgaccgtgggc
accatcaccgaggtctacgactatctgcggctgctctacgcgcgggcgggcacgccgcac
tgtccggtgtgcggcgagctgatcgccaagcagacgccgcagcagatcgtcgaccaggtg
ctggccatggaggagggcatccgcttccaggtgctcgctccggtggtgcgcacccgcaag
ggtgagttcgtcgacctgttcgaccagctcaacacgcagggctactcccgcgtgcgggtc
gacggcgtggtgtatccgctcaccgatccgccgaagctgaagaagcaggagaagcacgac
gtcgaggtcgtcgtcgaccggctggcggtcaagccgacctccaaacagcgcctgaccgat
tcgatcgagaccgccctgcggctcgccgacggcatcgtggtcctcgacttcgtcgaccgc
gacgagcacgcgcacgaccgggagcgccgcttctccgagcgtctcgcctgcccgaacggt
cacccgctcgacatcgaggacctggagccgcgctcgttctcgttcaactcgccctacggc
gcctgcccggactgcaccggcctcggcatccgcaaggaggtcgacccggaactggtggtg
cccgatccggcgctgagcctgaacgagggcgccatcgcgccgtggtcgcgcgggcagacc
gccgagtacttcacccggctgctgtccggcctggcggattccatcggtttctccatggac
accccgtggcaggatctgcccctcaaggcgcgcaaggccgtgctcgagggcagcgccgac
caggtgcacgtgtcctacaccaaccgctacggccgcaagcgctcgtactacgcggacttc
gagggcgtgatgccgttcctgcagcggcgcatggagagcaccgagtccgagcagatgaaa
gagcactacgacgggtacatgcgcgacatcccgtgcccggtgtgcaacggcgcccggctg
cgcccggagatcctcgccgtcaccatcgccgcgaacggcgacaagaagtccatcgccgac
gtcagcgacctgtccatcggcgaatgctcggcgttcctgaattcgctcaccctcggcgag
cgcgaagccgccatcgccgggcaggtgctcaaggaggtgcaggcgcggctgggcttcctg
ctcgacgtcggcctggagtacctcacgctgtcgcgcgcggccgccacgctctccggcggc
gaggcgcagcggatccggctcgccacccagatcggctccggtctggtcggcgtgctctac
gtgctcgacgagccgtccatcggcctgcaccagcgggacaaccgcaggctcatcgaaacc
ctcacgcgcctgcgcaatctcggcaacacgttgatcgtggtcgagcacgacgaggacacc
atccgtgcctcggactgggtggtcgacatcggcccgttcgccggtgagcacggcggcacg
gtggtgcacagcgggccctacgaagagctgctcaccgatccgaactcgctgaccggggcg
tacctgtcgggccgggagcggatcgaggtgccgctggtgcgccgtccggtcaccaagaag
cggcagctcaccgtcgtgggagcgaacgagcacaatctcaagggcatcgacgtcgccttc
ccgctcggcgtgctgacctcggtgaccggcgtctccggctcgggcaagtcgaccctggtg
aacgacatcctggccaccgtgctggcgaaccggctcaacggcgctcggcaggtgcccggc
aggcacacccgggtcaacgggctcgaccacctggacaagctggtgcaggtggaccagtcg
ccgatcggccgcacgccgcggtccaacccggccacgtataccggcgtcttcgacaagatc
cgcacgctgttcgcggccaccaccgaggcgaaggtgcgcgggtaccagccgggccggttc
tcgttcaacgtcaagggcggtcgctgcgaggcatgctccggtgacggcacgctgaagatc
gagatgaacttcctgccggacgtctacgtcccctgcgaggtctgccacggcgcccgctac
aaccgggaaaccctcgaggtccactacaagggcaagaccatcgccgaggtgctggacatg
tccatcgaggaggcggccgagttcttcgagccggtcacctcgatccaccgctacctcaag
acactggtggacgtggggctcggctatgtgcgcctcggccagagcgctcccaccctctcc
ggcggcgaggcgcagcgggtgaaactcgccgccgagttgcagaagcggtccaccggccgc
accgtgtacatcctcgacgagccgaccaccggcctgcatttcgaggacatccgcaagctg
ctcaacgtcatcaacggtcttgtggacaagggcaacacggtgatcgtcatcgaacacaac
ttggacgtcatcaagacctccgactgggtgatcgacatgggccccgagggcggctccggc
ggcggcaccgtcgtggcggaaggcacgccggaggaggtcgccgccgtcgcgcacagctac
accggccagttcctgaaggaggtgctggaccagccacccgcgccacggagcgccgcgaag
aaggctccggtgaagaaggccgcggcgaaggccgccaagcgtccggtgaagaaggccgcg
gcggtcggctga
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integrated database retrieval system
