Nocardia sputorum: IFM12276_46070
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Entry
IFM12276_46070 CDS
T09151
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
nspu
Nocardia sputorum
Pathway
nspu00860
Porphyrin metabolism
nspu01100
Metabolic pathways
nspu01240
Biosynthesis of cofactors
Module
nspu_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IFM12276_46070 (cobD)
Enzymes [BR:
nspu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
IFM12276_46070 (cobD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BDU01579
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All DBs
Position
complement(5051662..5052579)
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AA seq
305 aa
AA seq
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MQKGTSTALGLLLGFALDRVFGDPRRWHPVAGFGSAVAALESVTYADRRAAGLLHETLAV
GAVVGLGAAVRRGGVAATAAATWTVLGGRSLARTGRAMADRLAGGDLDGARALLPSLCGR
DPQALDADGLARAALESIAENTSDASVAPVVWGAVAGIPGLLGYRAVNTLDAMIGYRNER
YRRFGWAAARVDDAANLIPARITGLLTAALAPLIGGGPAAALAAWRRDAAGHPSPNAGVV
EASMAGALGVRLGGRTEYPHGVEMRPILGDGPAPTVHDLRRAVRLSEAVQLAATLLAAAV
ALTRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaaggggacctccaccgcgctcggtttgctgctcggattcgcgctcgatcgagtg
ttcggggatccgcgccggtggcatccggtggccggattcggctcggcggtggcggctttg
gagtcggtgacctacgccgaccggcgcgcggcggggttgctgcacgagacgctggccgtc
ggcgcggtggtcgggctcggggcggccgtgcggcgcggcggcgtggccgcgaccgccgcc
gccacctggaccgtgctgggtggacgcagtctggcccggaccggtcgcgcgatggccgac
cggttggccggtggcgacctcgacggcgctcgcgcgctcctgccttctctctgtggccgc
gatccgcaggcgctggacgcggacgggctcgctcgcgcggcactggagtccatcgccgag
aacacctccgacgcgtccgtcgcgccggtggtgtggggagcggtggcgggcatcccgggt
ctgctcgggtatcgcgcggtcaacacgctggacgcgatgatcggctaccgcaacgagcgc
taccggcgtttcggctgggccgccgcccgcgtcgacgacgcggccaacctgatcccggcg
cggatcaccggtttgctcaccgccgccctcgcccccttgatcggtggcgggcccgctgcc
gccctggccgcatggcggcgggacgcggccggccatcccagccccaacgcgggggtggtg
gaagcgtcgatggccggggcgctcggcgtccggctgggtggccgtaccgagtacccgcac
ggtgtcgagatgcgcccgatcctcggggacggcccggctcccacggtgcacgacctgcgc
cgcgcggtccgtctttccgaagcagtgcagcttgccgccacgctgctcgccgccgccgtc
gccttgaccaggcgctga
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