Nocardia sputorum: IFM12276_48200
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Entry
IFM12276_48200 CDS
T09151
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nspu
Nocardia sputorum
Pathway
nspu03030
DNA replication
nspu03430
Mismatch repair
nspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IFM12276_48200
03430 Mismatch repair
IFM12276_48200
03440 Homologous recombination
IFM12276_48200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nspu03032
]
IFM12276_48200
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_48200
Enzymes [BR:
nspu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IFM12276_48200
DNA replication proteins [BR:
nspu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IFM12276_48200
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IFM12276_48200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
HAD
Motif
Other DBs
NCBI-ProteinID:
BDU01792
LinkDB
All DBs
Position
complement(5264596..5265546)
Genome browser
AA seq
316 aa
AA seq
DB search
MHLVLGEEELLIERALSTVTAQVRALAPDPDAVPVDRLRAGDASTAELAELLSPSLFAED
RVIILESAAEAGKDAVAVITEAAQSPPEGVVLVVLHSGGGRAKALAPALQKAGAVTHDCA
KLTKAAERVEFVRGEFRTAGVRVSGEVVQVVLESVGSDLRELAAACGQLAADTGGKIDVA
AVRRYYSGKAEVSGFDVAELAVAGDRPGAMEALRWANDRGVPHVLLADALADSVHTIARV
GSAGRGDPFKLAQQLGMPPWKVKKAQAQARNWTPATIGSALQVVATLNADVKGGAADTGY
ALEHALTRILDLHGAG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctggtactcggcgaagaagagctgctgatcgagcgggcgttgagtacggtgacc
gcgcaggtccgggcgttggctccggatccggacgccgtgcccgtcgatcgtctgcgcgcg
ggggatgccagcaccgcggagctggcggaactgctgagtccgtcgctgttcgccgaggac
cgggtgatcatcctggagtccgcggccgaggcggggaaagacgcggtcgcggtcatcacc
gaggcggcgcagagtccgcccgagggtgtggtgctcgtcgttctgcactccgggggcggc
cgggccaaggcgctcgcacccgccttgcagaaagccggggccgttactcatgactgcgcg
aagctgaccaaggccgccgagcgcgtcgagttcgtgcggggtgagttccgcaccgccggc
gtgcgggtgtccggcgaagtcgtccaagtggtactggagtcggtgggttcggacctgcgt
gagctggcggcggcgtgcgggcagttggctgcggacaccggcgggaagatcgatgtggcg
gccgtgcgccgctactactcgggcaaggccgaggtctccggattcgacgtggccgagctc
gcggtggcaggcgatcgccccggtgcgatggaggcgctgcgctgggcgaacgaccgtggc
gtgccgcacgtcctgctcgccgacgcgctcgccgactcggtgcacaccatcgcgcgtgtc
ggctcggcgggccgcggtgatccgttcaaactggcccagcaactcggcatgccgccgtgg
aaggtgaagaaagcgcaagcccaggcccgcaactggacccccgcgacgatcggctccgcc
ctccaagtcgtcgccaccctcaacgccgacgtgaagggcggtgccgccgatacgggctac
gcgctggaacacgccctcacccgcatcctcgatctgcacggggcgggctga
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