Nocardia sputorum: IFM12276_49960
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Entry
IFM12276_49960 CDS
T09151
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nspu
Nocardia sputorum
Pathway
nspu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IFM12276_49960 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nspu03019
]
IFM12276_49960 (orn)
03009 Ribosome biogenesis [BR:
nspu03009
]
IFM12276_49960 (orn)
Messenger RNA biogenesis [BR:
nspu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IFM12276_49960 (orn)
Ribosome biogenesis [BR:
nspu03009
]
Eukaryotic type
Pre-60S particles
RNases
IFM12276_49960 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BDU01968
UniProt:
A0ABN6U9J9
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All DBs
Position
5492952..5493605
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AA seq
217 aa
AA seq
DB search
MSDKYMVWMDCEMTGLRLDSDKLIEVAALVTDSDLNILGEGVDIVIHADDDALAAMPAVV
AEMHARSGLTDEVRRSTVTLEEAEQRVLDYIREYIPTPRTVPLAGNSIATDRGFIARDMP
LLDAHLHYRMVDVSSIKELCRRWYPRIYFGQPEKGLSHRALADIQESIRELEYYRRTVFV
APPGPSTTEIAAVAAEVSESAAQRTESAQVNGSPDAD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaaatacatggtgtggatggattgcgagatgaccggcttgcgcttggacagc
gacaagctgatcgaggtggccgcactcgtgaccgacagcgatctcaacatcctcggcgag
ggcgtggacatcgtcatccacgccgacgacgacgcgctggccgcgatgcccgcggtggtc
gccgagatgcacgcgcgctccgggctgaccgacgaggtccgccgctccaccgtcaccctc
gaagaggccgagcagcgcgtgctcgactacatccgcgagtacatccccaccccgcgcacc
gtgccgctggccggtaactcgatcgccaccgaccgcggtttcatcgccagggacatgccc
ctgctcgatgcccacctgcactaccggatggtcgacgtgagctcgatcaaggaactgtgc
cgccgctggtacccgcgcatctacttcggccagccggagaagggcctgagccatcgcgcg
ctggccgacatccaggagtccatccgggaactggagtactaccggcgaaccgtgttcgtc
gcgccgcccggtccgtccaccaccgaaatcgccgcagtcgccgccgaggtctccgagagc
gccgcacaacggaccgaatcggcgcaggtcaacggctcgccagacgccgattag
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