Nocardia sputorum: IFM12276_59370
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Entry
IFM12276_59370 CDS
T09151
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nspu
Nocardia sputorum
Pathway
nspu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IFM12276_59370 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_59370 (xth)
Enzymes [BR:
nspu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IFM12276_59370 (xth)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IFM12276_59370 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BDU02909
UniProt:
A0ABN6UCH1
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All DBs
Position
6516003..6516833
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AA seq
276 aa
AA seq
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MRLATWNVNSIRSRLDRVADWLDRQDIDVLAIQETKCRDDQFPFERFDELGYEVAHLGIN
QWNGVAIVSRVGLADVEFAFPDQPGFDKDAGESLISTPVVESRAIGATCGGVRVWSLYVP
NGRTLGDPHYAYKLEWLAALRDNGARWLAEDPQAKIALVGDWNIAPTDDDVWSVEYFADK
THTSQPERAAFQAVVDAGYADVMRPFAPGPGVYTYWDYTQLRFPRKEGMRIDFILASPAL
AATVTDAMVDREARKGKGASDHAPVIAEFADEPGRS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctcgccacctggaatgtcaactcgatccgctcccggctcgaccgtgtcgcggac
tggctcgatcgccaggacatcgacgtgctggccatccaggagaccaagtgccgtgacgac
cagttcccgttcgagcgcttcgacgagctgggctacgaggtcgcccatctggggatcaac
cagtggaacggggtggcgatcgtctcccgggtcggtctcgccgatgtcgagttcgccttc
ccggaccagcccggtttcgacaaggacgcgggcgagtcgctgatcagcacgccggtcgtc
gagtcccgcgcgatcggcgccacctgcggtggcgtgcgggtgtggagcctgtacgtgccc
aacggccgcaccctgggcgacccgcactacgcctacaagctggaatggctggccgcgctg
cgggacaacggcgcgcgctggctggccgaggacccgcaggccaagatcgcgctggtgggc
gactggaacatcgccccgaccgacgacgatgtgtggtccgtggagtacttcgccgacaag
acgcacacgtcgcagccggaacgcgcggccttccaggccgtcgtggacgccggatacgcg
gatgtcatgcgcccgttcgcgccgggaccgggcgtttacacctattgggattacacccag
ctgcgcttcccgcgtaaagaggggatgcgcatcgatttcatcctcgcttcccccgcgctc
gccgccaccgtgacggacgccatggtcgatcgtgaggcgcgaaagggcaagggcgccagc
gaccacgctccggtgatcgccgaattcgccgacgaacccgggcgctcgtga
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