Nocardia sputorum: IFM12276_63760
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Entry
IFM12276_63760 CDS
T09151
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nspu
Nocardia sputorum
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nspu03032
]
IFM12276_63760 (gyrA)
03400 DNA repair and recombination proteins [BR:
nspu03400
]
IFM12276_63760 (gyrA)
Enzymes [BR:
nspu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IFM12276_63760 (gyrA)
DNA replication proteins [BR:
nspu03032
]
Prokaryotic type
DNA Topoisomerases
IFM12276_63760 (gyrA)
DNA repair and recombination proteins [BR:
nspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IFM12276_63760 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
Motif
Other DBs
NCBI-ProteinID:
BDU03348
LinkDB
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Position
6985882..6988389
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AA seq
835 aa
AA seq
DB search
MTDITLPPDGAGDRVEPVDIQLEMQNSYIDYAMSVIVGRALPEVRDGLKPVHRRILYAMY
DNGYRPDRGYVKSARPVSDTMGNYHPHGDSAIYDTLVRMAQPWAMRYPLVDGQGNFGSRG
NDGAAAMRYTECRLTPLAMEMLREIDHETVDFIPNYDGKTQEPVVLPSRVPNMLMNGSNG
IAVGMATNIPPHNLTELANAIYWALDNHDADEETTLAACMERIKGPDFPTAGLIVGTQGI
HDAYTTGRGSIKMRGVVEIEEDNRGRTTIVITELPYQVNTDNFINAIAEQVKDGKIAGIA
DIHDESSDRVGLRIVVTVKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLRLDQ
MIRFYVNHQLDVIIRRTRYLLRKAEERAHILRGLVKALDALDEVIALIRRSANTDTARTG
LMQLLDIDEIQATAILDMQLRRLSALERQKIIDDLAKIEAEIADYKDILDKPERQRAIVR
DELAEIVDKYGDDRRTQIISADGDVADEDLIAREDVVVTITETGYAKRTKTDLYRSQKRG
GKGVQGAGLKQDDIVKHFFITSTHDWLLFFTNKGRVYRAKAYELPEANRTARGQHVANLL
AFQPDEKIAQIIQIKSYDDAPYLVLATKNGLVKKSKLTDFDSNRSGGIVAVNLRDEDELV
GAVLCSADDDLLLVSALGQSIRFSATDEALRPMGRATSGVQGMRFNDSDELLSLNVVRAG
TYLLVATSGGYAKRTAIEEYTPQGRGGKGVLTIQFDAKRGTLVGALIVDDDDELYAITSG
GGVIRTAAKQVRKAGRQTKGVRLMNLAEGDTLLAIARNADEPDPDQVSGGGDTGS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcaccctgccgccggacggtgcgggcgaccgcgtcgaaccggtcgacatc
cagctggagatgcagaacagctacatcgattacgccatgagcgtgatcgtcggccgcgcg
ctgcccgaagtgcgcgacggcctcaagccggtgcatcgccgcatcctctacgccatgtac
gacaacgggtaccggcccgatcgcggctatgtgaagtccgcgcgcccggtgtcggacacg
atgggcaactaccacccgcacggcgactcggcgatctacgacacgttggtgcgcatggcc
cagccgtgggcgatgcgctacccgctggtagacggccagggcaacttcggcagccgcggt
aacgacggcgccgcggccatgcgctacaccgagtgccgcctcacgccgctggcgatggag
atgctgcgcgagatcgaccacgagacggtcgatttcatccccaactacgacggcaagacg
caggaaccggtggtcctgccgagccgcgtgccgaacatgctgatgaacggcagcaacggc
atcgcggtcgggatggcgaccaacatcccgccgcacaacctgaccgagctggcgaacgcg
atctactgggcgctggacaaccacgacgccgacgaggagaccaccctcgccgcgtgcatg
gagcggatcaagggcccggacttcccgaccgcgggtctgatcgtcggcacccagggcatc
cacgacgcgtacaccaccggccgcgggtccatcaagatgcgcggcgtcgtcgagatcgaa
gaggacaatcgcggccgcaccacgatcgtcatcaccgagctgccctaccaggtcaacacc
gacaacttcatcaacgcgatcgccgagcaggtcaaggacggcaagatcgcgggcatcgcc
gacatccacgacgagtcctccgaccgcgtcggcctgcgcatcgtcgtgacggtcaagcgg
gacgccgtggccaaggtcgtgctgaacaacctgtacaagcacacccagctgcagaccagc
ttcggcgccaacatgctgtccatcgtcgacggcgtgccgcgcacgctgcggctggaccag
atgatccggttctacgtcaaccaccagttggacgtgatcatccggcgcaccaggtacctg
ctgcgcaaggccgaggagcgggcccacatcctgcgcggcctggtcaaggcgctcgacgcg
ctcgacgaggtcatcgcgctgatccgccgctcggccaacaccgacaccgcgcgcaccggc
ctgatgcagttgctcgacatcgacgagatccaggcgaccgcgatcctggacatgcagctg
cgccggctctcggcgctggagcgacagaagatcatcgacgatctggccaagatcgaagcc
gagatcgccgactacaaggacattctcgacaagccggagcgtcagcgcgcgatcgtgcgc
gacgagctggccgagatcgtggacaagtacggcgacgaccggcgcacccagatcatctcc
gccgacggcgacgtggccgacgaggatctgatcgcccgcgaggacgtggtcgtcacgatc
accgagaccggctacgccaagcgcaccaagaccgacctctaccgcagccagaagcgcggc
ggcaagggcgtgcagggcgcgggtctcaagcaggacgacatcgtcaagcacttcttcatc
acctcgacgcacgactggctgctgttcttcacgaacaagggccgggtctaccgggccaag
gcctacgagctgcccgaggccaaccgcaccgcgcgcggccagcacgtggcgaacctgctg
gccttccagccggacgagaagatcgcccagatcatccagatcaagtcctacgacgacgcg
ccgtacctggtgctcgccaccaagaacggcctggtgaagaagtcgaaactgaccgatttc
gactccaaccgcagcggcggcatcgtcgcggtgaatctgcgcgacgaggacgaattggtc
ggcgccgtgctctgctcggccgacgacgacctgctgttggtctccgcgctcggccagtcg
attcgcttctcggccaccgacgaggcgctgcgtccgatggggcgcgccacctccggcgtg
cagggcatgcggttcaacgacagcgatgaactgctgtccctcaatgtggttcgcgccggc
acatatctgctggtcgccacgtccggcggctacgccaagcgcaccgcgatcgaggagtac
accccgcagggccgcgggggtaaaggcgtattgaccatccagttcgacgcgaaacgtggc
accctggtcggggcgctcatcgtcgacgacgacgacgagttgtacgcgatcacctccggt
ggcggcgtcatccggacggcggcgaagcaggttcgcaaggccggccgacagaccaagggt
gtgcgattgatgaacctcgcggagggcgatactttgcttgcgatcgcgcgcaacgccgac
gagcccgatcccgatcaggtctccggtggcggcgacaccggctcctag
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