Nocardia seriolae: NS506_00348
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Entry
NS506_00348 CDS
T04599
Name
(GenBank) hypothetical protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
nsr
Nocardia seriolae
Pathway
nsr00550
Peptidoglycan biosynthesis
nsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NS506_00348
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nsr01002
]
NS506_00348
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsr01011
]
NS506_00348
Enzymes [BR:
nsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NS506_00348
Peptidases and inhibitors [BR:
nsr01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
NS506_00348
Peptidoglycan biosynthesis and degradation proteins [BR:
nsr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NS506_00348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
APA94432
UniProt:
A0A0B8NE18
LinkDB
All DBs
Position
complement(340348..341811)
Genome browser
AA seq
487 aa
AA seq
DB search
MFGRNKQNIGGLEAKRRRRTWIVVSFGLVVVLVAAASVALILKPWTEEFRHGGLTIADPP
APVKPIPQVAPAPVTAPAATATGLAAALGAAVANPDLGAFAASVSDGDTGKVLWTLDADK
AMIPSSTGKILTIAGALLALPDDHRVTTKVVAGAVPGQIVLVGGGDPTITAQPDGKGYYP
DAPKLQDLVAQVKASGQRVDSILVDTSAYAGPNFAPGWEAADIAGGSIAPLDPVMIDGGR
LDPLVEYSPRTATPALDAGKRLATELGVDPAKVTMGNAPAGATQLAVVQSAPLRERMLQA
MVHSDNVLAEAIGREVAVALGQEPSFTGAVTAMSTVLQAAGFDLNGLKMSDNSGLSTDDR
IPPRLLNRVLTVAALPGTAGSQGNSTADPASDKTAAGSPLAPLLDYLPVAGATGSLANRY
VDRDREGAGWIRAKTGTLSVSSALVGYVLDRDGRVLTFALMSNDRPPEVSRPALDAVANV
LRNCGCS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgtttggtcggaacaagcagaacatcggtggtctggaggccaagcggcggcgcagaacc
tggatcgtggtgtcgttcgggctggtcgtggtgctggtggcggccgcgtcggtggccctg
atcctgaagccgtggaccgaggaattccggcacgggggcttgaccatcgccgacccgccc
gcacccgtgaagccgattccgcaggtcgcgcccgccccggtgaccgcgcccgccgccacc
gccaccggtctggccgccgccctcggggcggccgtcgcgaatccggatctgggcgccttc
gcggcctcggtctcggatggggacaccggcaaggtgctgtggaccctggacgccgacaag
gccatgatcccgtcctccaccggcaagatcctgaccatcgcgggcgcgctgctggccctg
cccgacgaccaccgggtcaccaccaaggtggtggccggtgcggtgcccgggcagatcgtg
ctggtcggcggcggcgatccgaccatcaccgcgcagccggacggcaagggctactacccg
gacgcgccgaagttgcaggatctggtcgcgcaggtcaaggcgtccgggcagcgggtggat
tcgatcctggtggacacctccgcctacgccggaccgaatttcgcacccggctgggaggcc
gccgatatcgcgggcggctccatcgcgccgctggacccggtgatgatcgacggcgggcgg
ctcgacccgctggtcgaatattcgccgcgcaccgccactcccgcgctcgacgccgggaag
cggctggccaccgagctcggggtcgatccggcgaaggtgaccatgggcaatgccccggca
ggcgcgacccagctggccgtcgtgcagtccgcgccgctgcgcgaacgcatgctgcaggcc
atggtgcactccgacaatgtgctggccgaggccatcggccgcgaggtggccgtcgcgctc
gggcaggagccctccttcaccggcgcggtgaccgccatgtcgaccgtgctgcaggccgcg
ggattcgatttgaacgggttgaaaatgtccgacaacagcggactttcgaccgacgaccgg
attccgccgcgtctgctcaaccgggtgctgacggtggccgcgctgcccggcaccgcgggc
tcgcaaggcaattcgaccgccgacccggcctcggacaagaccgccgccggatcgccgctc
gccccgctgctggactacctgcccgtcgcgggggcgaccggctcactggccaaccgctac
gtcgaccgggatcgggagggcgcgggctggattcgcgccaagaccggaactctgtccgtg
tcgagcgcgttggtgggttatgtgctggaccgcgacggacgggtgctgacgtttgccctc
atgtcgaacgatcggcccccggaggtgagccgacccgcgttggacgccgtcgccaacgta
ctgcgcaactgtggctgctcctga
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