Nocardia seriolae: NS506_01145
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Entry
NS506_01145 CDS
T04599
Name
(GenBank) putative HTH-type transcriptional regulator YdcR
Organism
nsr
Nocardia seriolae
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
HTH_Crp_2
DegT_DnrJ_EryC1
HTH_11
Motif
Other DBs
NCBI-ProteinID:
APA95218
UniProt:
A0ABC8ALS8
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Position
complement(1204885..1206441)
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AA seq
518 aa
AA seq
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MANTGPSADLKKISSAPILACMATRVIGAASLTRDLGRWRNEEPGAAADSAKRSARPAYV
ALAESIRLLIHDGRAPLGVALPSERDLATSLAVSRTTVTSAYTLLREHGYLISRQGSRST
VALPPTVVHDGAKPARSILAMMAQPELPTIDMTYAAMAAPPQMTEAYSFALQGLPTYLGT
HGMDPVGVLMLREALARRYTERGLPTDPEQILITLGAQHGLRLLLNVLTTPAERVLIEHP
TYPNAIEAIRDVGARPVPVPMRPDGWDLDGIRSAARQTAASVAYLIPDFNNPTGHLLDTE
GRAELAAIARETRMTVIVDESMVDLNLSDLESPPPVAAFARNSEIVTIGSASKSFWGGLR
VGWVRANQSLITKLLGTRSTVDLGTPVMDQLATVHLLRHADEILTARRAQLRSRRAALLE
TLAEELPDWYVNPGAGGMSLWAQLPAPVSTALAATAPNHGVLLAAGPRFGVQGAFERFIR
LPFTHEEPDIRIAVKSIATAYQGLTPHAADPLAPLIAY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtggccaatactggaccttccgcggacttgaagaaaatatccagtgccccgatactggcc
tgtatggcgacacgagtgatcggcgcggccagcctgacgcgcgacctgggccggtggcgg
aacgaggaaccgggagccgccgccgacagtgcgaagcgatcggcgcggcccgcgtatgtg
gcactggcggagagcatccggctgctcattcacgacgggcgcgcgcccttgggcgtggcg
ctgcccagtgaacgggatctggcgaccagcctcgcagtcagccgtaccaccgtcacctcc
gcgtacacgctgctgcgcgagcacggctatctgatcagccgccagggttcgcgcagcacc
gtggcgctgccgccgaccgtggtgcacgacggcgcgaagcccgcccgcagcattctggcc
atgatggcgcagcccgaactgccgaccatcgacatgacctatgccgccatggccgcgccg
ccgcagatgacggaggcgtattccttcgccctgcaaggacttccgacatatctcggcacc
cacggcatggatccggtgggcgtgctcatgctgcgcgaggcgctggcccgccgctacacc
gagcgcggcctgcccaccgatccggagcagatcctgatcaccctcggcgcccagcacggc
ctgcgcctgctgctcaatgtgctcaccacgccggccgaacgggtgctgatcgagcacccc
acctatccgaacgccatcgaggccattcgcgatgtcggcgcgcgcccggtgccggtcccc
atgcgccccgacggctgggatctggacggaatccgcagcgccgcaaggcaaaccgccgcc
agcgtcgcctacctgatccccgacttcaacaaccccaccggccacctgctcgacaccgag
ggccgggccgagctggccgccatcgcccgcgagacccgcatgacggtcatcgtcgacgaa
tccatggtcgacctgaacctctccgatctcgaatccccgccccccgtagccgctttcgcc
cgcaactcggaaatcgtcaccatcggctcggcctccaagtccttctggggcggcctccgg
gtcggctgggtccgagccaaccagtccctcatcaccaaactcctcggcacccgctccacc
gtcgacctcggcaccccggtcatggaccagctggccaccgtccatctcctgcgtcacgcc
gacgaaatcctcaccgccagaagggctcaactccgctcccgccgagccgccctgctggaa
accctcgccgaggaactccccgactggtacgtcaaccccggcgcgggcggcatgtccctg
tgggcccagctccccgccccggtctcgaccgccctcgccgccacggcccccaaccacggc
gtactactggccgccggaccgcgtttcggcgtccagggcgctttcgaacgcttcatccgc
ctgcccttcacccacgaggaacccgacatccgcatcgcggtgaagtccatcgccaccgcc
taccagggcctcaccccgcacgccgccgacccgctggccccgctcatcgcctactga
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