Nocardia seriolae: NS506_01852
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Entry
NS506_01852 CDS
T04599
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nsr
Nocardia seriolae
Pathway
nsr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NS506_01852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsr03000
]
NS506_01852
03400 DNA repair and recombination proteins [BR:
nsr03400
]
NS506_01852
Enzymes [BR:
nsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NS506_01852
Transcription factors [BR:
nsr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NS506_01852
DNA repair and recombination proteins [BR:
nsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NS506_01852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
APA95920
UniProt:
A0AAW9VYX3
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Position
complement(1958341..1959915)
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AA seq
524 aa
AA seq
DB search
MVVSVSANGLDFERCYRAVATRDARFDGHFVTAVRTTGIYCRPSCPAITPKRTNVTFLPT
AAAAQQSGFRACRRCLPDAAPGSPLWNTRADLASRAMRLIGDGVIERGGVPALADALGYS
QRQLTRVLTSELGAGPLALARAHRAHTARLLIQTTRLSMSDIAFAAGFASIRQFNDTVRE
VFAVSPTTLREESRRRNGDTLPATNGLLTLRLPYREPLDQSWLEWFLAAHTVPGLELWEN
GIYTRSLRTPHGHTTIRLSIQPGHVRASLSLQDMRDLAPTVARIRHFLDLDADPVGIDEA
MTAAMTESPLHPHISGTSSGMHLSGGVVLPGGIRVPGCLDGPELLLRTMIGQQISVAAAN
THTARLVQGLGEAIAGPIPHLFPTPETIAEHGSEVLTGPGRRVDAIVGAAKALATGDLVL
HSGRTASDLRRDLLALDGVGPWTADYVTMRLLADPDVLLHSDLVVRRGAGLLGLELTDTA
RFAPWRSYLTMHLWKHALAHPAESNTKAIAPNIKTPTGNRRTIR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggtggtatccgtgagtgcgaacggattggatttcgagcgttgctaccgcgccgtggcg
acccgggatgcccggttcgacgggcatttcgtgaccgcggtgcgcaccaccggaatttat
tgccgcccttcttgtccggcgatcacccccaaacgaaccaacgtcaccttcctgcccacg
gccgcggccgcgcagcagagcggattccgcgcctgccgccgctgcctgcccgatgccgcc
cccggatcaccgctctggaacacccgcgccgacctggcgtcgcgggccatgcgattgatc
ggcgacggcgtcatcgaacgcggcggcgtgcccgccctcgccgacgcgctgggctactcc
cagcggcagttgacccgcgtgctgaccagcgaactcggcgcgggcccactggctttggcg
cgggcgcaccgcgcgcacaccgcgcggctgctcatccagaccacccggctgtccatgtcc
gacatcgcgttcgcggccggattcgccagcatccgccagttcaacgacaccgtgcgcgag
gtcttcgcggtcagccccaccaccctgcgcgaggaatcccgccgccgcaacggcgacacc
ctgccggccaccaatggcctgctcaccctgcgactcccctaccgcgaaccgctcgaccaa
tcctggctggaatggttcctggccgcccacaccgtccccggcctggaactctgggagaac
ggcatctacacccgcagcctgcgaaccccccacggccacaccaccattcgcctgtccatc
cagcccggccacgtccgcgcctcgctgtccctgcaggacatgcgcgacctcgcgcccacc
gtcgcccgcatccgccacttcctggacctggacgccgacccggtcggcatcgacgaggcg
atgacggcggcgatgacggaaagcccactgcacccgcatatttcgggcacgagcagcggc
atgcacctatccggcggcgtcgtgctgcccggcggcatcagggtgccggggtgcctggac
ggaccggaactgttgctgcgcaccatgatcggccagcagatctcggtggccgccgccaat
acccataccgcgcggctggtacagggattgggcgaggccatcgcgggacccatcccgcac
ctgttccccaccccggagacgatcgccgagcacggctccgaggtgctgaccgggcccgga
cggcgggtggacgccatcgtcggcgcggccaaggcgctcgccaccggggacctggtgctg
cactccggccgcacggcgagcgacctgcgccgggatctgctggccctggacggggtcgga
ccctggaccgcggactacgtcacgatgcgcctgctcgccgacccggacgtactcctgcac
tccgacctggtggtgcgccgcggcgcgggactgctcggcctcgagctcaccgacaccgcc
cgcttcgccccgtggcgctcctacctcaccatgcacctgtggaagcacgccctggcccac
ccggccgagagcaataccaaagcaatcgcgccgaacatcaagactcccaccggcaaccgg
aggacaatccgatga
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