Nocardia seriolae: NS506_02543
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Entry
NS506_02543 CDS
T04599
Symbol
recQ
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsr
Nocardia seriolae
Pathway
nsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NS506_02543 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsr03019
]
NS506_02543 (recQ)
03400 DNA repair and recombination proteins [BR:
nsr03400
]
NS506_02543 (recQ)
Enzymes [BR:
nsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NS506_02543 (recQ)
Messenger RNA biogenesis [BR:
nsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NS506_02543 (recQ)
DNA repair and recombination proteins [BR:
nsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NS506_02543 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
APA96607
UniProt:
A0ABC8AR14
LinkDB
All DBs
Position
2716857..2719082
Genome browser
AA seq
741 aa
AA seq
DB search
MSAPEVETAVAGNLGEDGNDPAHQVLRKTFGYDSFRGPQREIVEQVISGGDALVLMPTGG
GKSLCYQIPALVRPGVGVVISPLIALMQDQVDALNAVGVRAGFLNSTQFPDERRTVEAQF
VAGELDVLYLAPERLRLDSTAQLLDRGKISVFAIDEAHCVSQWGHDFRPDYLGLSMLHER
WPDVPRIALTATATEATRKEIAERLDLTRAKHFVASFDRPNIQYRIEPKNRPEHQLLSFI
QNEHAGDAGIVYCLSRNSVEKTAAFLTANGVEAVPYHAGLDNRTRATNQSRFLREDGLVV
VATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQSSTAWMVYGLSDVVQQRK
MIDSSDGDAMHRRQLQLHLDAMLALCETVQCRRVQLLAYFGQPGERCGNCDTCLNAPEAW
DGTVPAQKVLSTVLRLKRERGQSFGAGHIVDILIGKRNPKVEQHAHHELKVFGIGTELRD
IEWRGVVRQLLAQGLLAVHGDYGVLTLTEASNQVLFEKREVMLRREPERAKAARTSKPAK
SSRLAAADLSRSDTDLFEKLRAWRGATAKEQGVPAYVVFHDATLREIATRKPTTLADLAG
ISGIGENKRAKYGEGVLEVIAAEAGAAGSGALDANAGISAEVAAAGDTTGNATTSAASAA
RSVSSHTGSRFGSADSAAGPRPRSAGKTAPESRRSSGSGSSAGAGRGSVSTPPPSNFAAA
DEIPWPDDVPPDYDELPPDYQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgccggaggtcgagaccgcagttgccgggaacctgggtgaggacggaaatgat
ccggcacaccaggttctgcgaaagacgttcgggtacgacagttttcgcgggccgcagcgg
gagatcgtcgagcaggtgatctccggcggcgacgcgctggtgttgatgcccaccggtggc
ggcaagtcgctgtgctatcagattccggcgctggtgcggccgggcgtgggcgtggtgatc
tcgcccttgatcgcgctcatgcaggatcaggtggacgcgctcaatgccgtgggcgtgcgc
gcggggttcctgaactcgacgcagttccccgacgaacggcgcacggtcgaagcgcaattc
gtggcgggggagctggatgtgctctacctcgcacccgaacggctgcggctcgactccacc
gcgcagctgctggatcggggcaagatctccgtcttcgccatcgacgaggcgcattgtgtc
tcccagtggggccacgatttccggcccgactacctcggtctgtccatgctgcacgagcgc
tggccggatgtgccgcgtatcgccctcaccgcgacggccaccgaggccacccgcaaggag
atcgccgaacggctggatctcacccgggccaagcacttcgtggccagcttcgaccggccc
aatatccagtaccggatcgagcccaagaatcggccggaacaccagctgctctcgttcatc
cagaacgagcacgccggtgacgcgggcatcgtgtactgcctctcgcgcaactcggtggag
aagaccgccgcgttcctgacggccaatggcgtggaggcggtgccgtatcacgcgggtctg
gacaaccggacccgcgcgaccaaccagtcgcggttcctgcgcgaggacggcctggtcgtg
gtcgccaccatcgccttcggcatgggcatcgacaagccggatgtgcgcttcgtcgcgcac
ctggacctgcccaagtcggtcgagggctactaccaggagaccggccgcgccgggcgtgac
ggccagtcgtccaccgcctggatggtgtacggcctcagtgacgttgtgcagcaacgcaag
atgatcgattcctccgacggcgacgcgatgcaccgccgccagctgcaactgcacctggac
gccatgctcgcgctctgcgagaccgtccagtgccgccgcgtccagctgctcgcctacttc
ggccagcccggcgagcgctgcggcaactgcgacacctgcctcaacgcccccgaggcgtgg
gacggcaccgtgcccgcccagaaggtcctctccaccgtcctgcgcctgaaacgcgaacgc
ggccagagcttcggcgcgggccacatcgtcgacatcctcatcggcaagcgcaaccccaag
gtcgagcagcacgcccaccacgagctcaaggtcttcggcatcggcaccgaactccgcgac
atcgagtggcgcggcgtggtccgccagctcctggcccagggtctgctggcggtgcacggc
gactacggagtgttgaccctcaccgaggccagcaaccaggtcctcttcgaaaagcgcgag
gtcatgctccgccgcgagcccgaacgcgccaaggccgcccgaacctccaagcccgccaag
tcctcccgcctcgccgccgccgatctcagcaggtccgacaccgacctgttcgaaaaactc
cgcgcctggcgcggagccaccgccaaggaacagggcgtccccgcctacgtcgtcttccac
gacgctaccttgcgggaaatcgccacccgcaaacccaccaccctcgccgacctggccggt
atctccggcatcggcgagaacaaacgcgccaaatacggcgaaggcgtgctcgaagtgatc
gccgccgaggccggtgcggcggggagcggcgcgctcgatgccaacgcgggaatctcggca
gaggttgccgcagcgggcgatacgaccggcaatgcaacgacttccgcggcctcggccgca
cggtcggtgtcatcgcacacgggctcgaggttcgggtcggcggactccgccgctgggccg
cgtccgcggagcgccggaaaaaccgcgcccgaatcgcgacgttcatccggttctggttcg
tcagccggcgcgggccgcggatcggtctcgaccccgccgccgtccaatttcgctgcggcg
gatgagattccgtggcccgacgacgttccgccggactacgacgagttgccgcccgattac
cagtag
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