Nocardia seriolae: NS506_05082
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Entry
NS506_05082 CDS
T04599
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nsr
Nocardia seriolae
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nsr03051
]
NS506_05082 (pafA)
Enzymes [BR:
nsr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NS506_05082 (pafA)
Proteasome [BR:
nsr03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NS506_05082 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
APA99128
UniProt:
A0A0B8N9T3
LinkDB
All DBs
Position
complement(5333708..5335051)
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSLGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLVQLVTHDRAGERVLEDLLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTASLVLEMIEAGVAFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYARAVEHLRNRDRDPQVDAVVDL
WGRTLDAVEAQDFAKVDTEIDWIIKRKLFQRYQDRYNMELSDPKIAQLDLAYHDIKRGRG
VFDLLARKGLAKRVTEDEAVDAAVNTPPQTTRAKLRGDFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgagaccgaattcggggtgacgtgcaccttccacggccaccgacggttgagt
ccagacgaggtggcccggtatttgttccgccgggtggtttccttgggccgtagttctaac
gtgttcctccgcaacggtgcccggctctaccttgacgtcggttcccatccggagtacgcg
acggccgagtgtgacagcttggtgcagctggtcactcacgatcgggccggtgaacgggtg
ctcgaggacctgctcatagacgccgagcagcggctggccgaggagggtatcggcggcgat
atctacctgttcaagaacaacaccgactccgcgggcaactcctacggctgccacgagaac
ttcctcgtggtccgcgccggtgagttctcccggatctcggatgtgctgctgccgttcctg
gttacccgtcagctcatctgcggcgcgggcaaggtgctgcagaccccgaaggctgccacc
ttctgcctgtcgcagcgggccgagcacatctgggagggcgtctcctcggcgaccacccgc
tcgcggccgatcatcaacacccgtgacgagccgcacgccgacgccgagaagtaccgccgg
ctacacgtgatcgtgggcgactcgaacatgagcgagacgaccaccatgctcaaggtgggc
acggcctcgctggtgctggaaatgatcgaggcgggcgtcgcgttccgagacttcgccctg
gacaacccgattcgggccatccgcgaggtgtcgcacgatctcaccggccgccgccccgtg
cggctggcgggcggccgccaggccagcgccctcgacatccagcgcgagtactacgcccgc
gccgtcgagcacctgcgcaaccgcgaccgcgacccgcaggtcgacgccgtggtggatctg
tggggccggaccctcgacgccgtcgaggcgcaggacttcgccaaggtggacaccgagatc
gactggatcatcaagcgcaagctgttccagcgctaccaggaccgctacaacatggagctg
tccgatcccaagatcgcccagctggatctggcctaccacgacatcaagcgcggccgcggc
gtcttcgacctgctcgcccgcaagggtctggccaagcgggtcaccgaggacgaggcggtg
gatgcggcggtcaacacgccgccgcagaccacccgggccaagctgcgcggcgatttcatc
accgccgcccaggaggccggacgcgacttcaccgtcgactgggtccacctcaagctcaac
gaccaggcgcagcggacggtcctgtgcaaggaccccttccgctcggtcgacgagcgcgtg
gatcgcctcatcgcctccatgtga
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