Nocardia seriolae: NS506_05842
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Entry
NS506_05842 CDS
T04599
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nsr
Nocardia seriolae
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsr03016
]
NS506_05842
Enzymes [BR:
nsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NS506_05842
Transfer RNA biogenesis [BR:
nsr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NS506_05842
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
APA99878
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Position
6126521..6127765
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AA seq
414 aa
AA seq
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MSVPDEPEATAAVPLLAPVDGVPPVLDSAAEVADAARALAAGTGPLAVDAERASGFRYSN
RAYLIQLRREGAGSFLIDPIPVDGDLEPLAAAINDLEWVLHSADQDLPGLAELGLYPARL
FDTELGGRLAGYERVGLAAMVEKLLGRELKKGHGAADWSTRPLPDDWLNYAALDVELLIE
LRDAVAADLAEQGKSDWAAQEFEHVRSAEQSAPKSDRWRRTSGIHTLRRTRQLAIVRELW
TTRDRLARLRDVAPARILPDSAIVAAATNEPKSIAQLRTLPIFGGPRQRRYSREWLGAVE
RARALPDSELPPLTQPFDGPPPVNRWERRDPAAAARLQRARAAMTDLSTEVSIPVENLLT
PDLLRRMCWDGLPKSATNGEAPGLIEDYLAAGGARPWQRELAVPRLSEALYPKD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtaccagatgagcccgaagccactgccgcggtaccgttgctcgcgccagtggac
ggtgtaccgccggtactggacagcgccgccgaagtggccgacgcggcccgcgcactggcc
gccggaaccggaccgctcgcggtcgacgccgagcgcgcctccgggttccgctactccaat
cgcgcctatctgatccagttgcgccgcgagggcgcgggcagcttcctgatcgacccgatt
ccggtggacggggatctggaaccgctcgccgcggccatcaacgatctggagtgggtgctg
cactccgccgatcaggatctgcccggactggccgaactcggtctgtacccggcccggctc
ttcgacaccgaactcggcggccgcctggcgggctacgagcgcgtcggcctggccgccatg
gtggagaagctgctcggccgcgagctcaagaagggccacggcgcggccgactggtccacc
cgcccgctgcccgacgactggctcaactacgccgccctcgatgtcgagttactcatcgag
ctgcgcgacgcggtcgccgccgacctggccgagcagggcaaatccgactgggccgcacag
gaattcgagcacgtgcgcagcgccgaacagtcggcccccaagtccgaccgctggcggcgc
acctccggcatccacaccctgcgccgcacccgccagctcgccatcgtccgcgaactatgg
accacccgcgaccgcctggcccgcctgcgcgatgtcgcccccgcccgcatcctgccggac
tcggcgatcgtggccgccgccaccaacgagcccaagtccatcgcccagctgcgcaccctg
ccgatcttcggcggcccgcgccagcgccgctactctcgcgaatggctcggcgcggtcgaa
cgcgcccgcgccctgcccgactccgaactccctccgctgacccagccgttcgacggccca
cccccggtcaaccgctgggagcgccgcgacccggccgccgccgcccgtctccagcgcgcc
cgcgccgccatgaccgacctctccaccgaggtctccatcccggtcgaaaacctcctgact
ccggacctgctgcgccgcatgtgctgggacggcctgcccaagtccgccaccaacggcgag
gcccccggcctcatcgaggactacctcgccgcgggcggcgcgcgcccctggcaacgcgaa
ctcgccgtcccccgcctgagcgaagccctctacccgaaggactga
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